Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0213 |
Symbol | |
ID | 4185318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 259415 |
End bp | 260167 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070223 |
Product | hypothetical protein |
Protein accession | YP_676845 |
Protein GI | 110636638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00496184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.650422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGC TAACAGTATT TGAAATTTGC GCAGCCATTT CAGTTGCAAC GTTTTTGCTT CCCTATCTGA TTTTTGGCGA CGGAATTATA CTATTGATCA TTATTTTTCC GGCAATGGCT GCGGAAAAAA TAACAGGCGA AAGAGGCCTT GATCTGGGCA GGAAATCTTA TGTCTATTTA TTCTTTTTGT ATTTGTTTGT ACTTACCGAA GTTTTAATCC TGGCAACCAT TTTATTTGGT GCCTATTGTC TGTTCTGGGG CTATCCCAGC ACATCAGAAA CAGCTGCTAC AGCAGTTGTT TCCACACCTC AGCCCAACGA AATTTCTTCA CTTATTCTTA TCAATAAACT ATTGCTTTTA GTTATAAGTT ATTTCACCTG TATGTTTATA TATAATTCAA TTAAATACAG AGAAGCTTAC CGGCAACTAA AACGGACAGA CTTTATGCTG TTTCAATTTG TGCCATTAGT GACAATACCC TTAGGCTACA TTTATTTATT GGGCTGCCTG CATTATTTAA CACATTTTCC GACGAATGAA AAAATAGGTC CCCTGCCAAC TATTGCAGGA TATTTGTATG TAGCATACCT GCTTTATAAT CTTGCAAAGC TGTTATTTTT TTATGCTAAA CGTTTACGTA CCGGATTTGC TGACCATAAA CTATCACAAA GCTTACGTAC GCTTGTTACA TTGGTTTATG ACATCACTTT CCTGTACTTT TTTTATCAGC TGTATTCAGT GTTAAAAATG TAG
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Protein sequence | MTPLTVFEIC AAISVATFLL PYLIFGDGII LLIIIFPAMA AEKITGERGL DLGRKSYVYL FFLYLFVLTE VLILATILFG AYCLFWGYPS TSETAATAVV STPQPNEISS LILINKLLLL VISYFTCMFI YNSIKYREAY RQLKRTDFML FQFVPLVTIP LGYIYLLGCL HYLTHFPTNE KIGPLPTIAG YLYVAYLLYN LAKLLFFYAK RLRTGFADHK LSQSLRTLVT LVYDITFLYF FYQLYSVLKM
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