Gene CHU_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0193 
Symbol 
ID4185572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp237478 
End bp237900 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content38% 
IMG OID638070202 
Producthypothetical protein 
Protein accessionYP_676825 
Protein GI110636618 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAACA AAATTAAAAT AGCGCGCGAT CCTCAAAACC TTAAAGCGGT ACGTGACTTT 
GTCAGTTCAA CGCTTCAGGG AATGTCTGTG CCTGATCCTG AAATCAATAT GATGGTTCTT
GCTGTGGATG AGGTATGTGC AAACAGAATT CTTCATACTC CGGCAAACAG CACCGAAGCA
TATAATAACA TTGAATTAGA GATTCAAAAC GATAATAATA ACTTCACTTT TTTAATTCGT
GATACAGGAG ACCCGTATGA TATCAATACC CACGAATCTC CTGATCTTCG TAAACTTATC
GCTGAAAAAC GCAAAGGCGG GATTGGCTTG CTTTTGGTTA AAAAAATTAT GGACTCTATA
GAAATATCAC GTTCTGAGCC TTATACAGTA TTATTGCTGC GCAAATCGCT TAAGTTTGCC
TGA
 
Protein sequence
MNNKIKIARD PQNLKAVRDF VSSTLQGMSV PDPEINMMVL AVDEVCANRI LHTPANSTEA 
YNNIELEIQN DNNNFTFLIR DTGDPYDINT HESPDLRKLI AEKRKGGIGL LLVKKIMDSI
EISRSEPYTV LLLRKSLKFA