Gene CHU_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0153 
Symbol 
ID4183585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp188793 
End bp189785 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content37% 
IMG OID638070162 
Productmethanol dehydrogenase regulator 
Protein accessionYP_676785 
Protein GI110636578 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.442514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.724123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCA AATCTGCAGA AGAAAAATCT CTCTATTACA GAAATAAAAT TAAAGAAGTC 
ATTGACGAAG TCGGTAAAGT AGTCGTTGGT CAAAAATACA TGATCAACAG GTTATTAATC
GGAATCTGCA CAGGCGGACA TATTTTACTG GAAGGCGTAC CAGGCTTAGC AAAAACGTTA
AGTGTAAACA CGCTTGCCAA AACAATGGAT CTGGACTTTC ATCGAATCCA ATTCACCCCG
GATCTACTTC CTTCTGATTT GATCGGAACT ATGATCTATA ATCAGCATAA AGGGAATTTT
GAAGTTAAGA AAGGTCCCGT ATTTTCCAAC TTTATATTGG CGGATGAAGT AAACCGGTCC
CCAGCAAAAG TACAGTCAGC GCTCTTAGAA TGTATGCAGG AAAAACAAGT TACAATAGGT
GATACAACAT ACCCGTTAGA CAACCCTTTC CTTGTACTTG CAACACAAAA CCCCGTAGAA
CAGGAAGGCA CATATCCATT ACCGGAAGCA CAGGTAGATC GTTTTATGAT GAAGATTCAT
TTAACTTATC TAGATAAAGA ATCTGAACTT GAAGTAATGA GACGTGTATC AAACATGAAC
TTTAATTATC AGGTGCAGAA AATCGTTTCT AAAAATGATG TCCTTGAAAT CCGCAATGAA
ATAAATAAAG TAACGATTTC TGAATCACTT GAAAAATACA TAATCGAATT AGTATTTGCT
ACCAGGTTTC CTGCTGAGTA CGGACTTGAG GCAGAAGCAT CGTATATCTT ATATGGAGCA
TCTACACGTG CGGCAATCAA TCTGAATCGT GTAGCAAAAG CAATGGCATT TTTCAATAAC
AGGGATTACG TATTGCCTGA AGACATTAAA GAAGTTGCGT ACGATATCTT AAACCATAGA
ATAATTTTGA ATTACGAAGC AGAAGCGGAA GGTATTTCAA CAAGACAAAT AATAGAAACA
ATTTTACGGA AAGTAAATAT CACTAAAGCA TAA
 
Protein sequence
MELKSAEEKS LYYRNKIKEV IDEVGKVVVG QKYMINRLLI GICTGGHILL EGVPGLAKTL 
SVNTLAKTMD LDFHRIQFTP DLLPSDLIGT MIYNQHKGNF EVKKGPVFSN FILADEVNRS
PAKVQSALLE CMQEKQVTIG DTTYPLDNPF LVLATQNPVE QEGTYPLPEA QVDRFMMKIH
LTYLDKESEL EVMRRVSNMN FNYQVQKIVS KNDVLEIRNE INKVTISESL EKYIIELVFA
TRFPAEYGLE AEASYILYGA STRAAINLNR VAKAMAFFNN RDYVLPEDIK EVAYDILNHR
IILNYEAEAE GISTRQIIET ILRKVNITKA