| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0147 |
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| Symbol | mutS |
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| ID | 4183580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 176172 |
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| End bp | 178742 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070150 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_676780 |
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| Protein GI | 110636573 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.692226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.372979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT ACAATGCTAT CAAAGGGAAA TATCCCGGGG CCTTGTTATT ATTTCGTGTA
GGGGATTTTT ATGAAACATT TTCTGAAGAT GCGATAAAGG CATCAAAGGT ATTAGGAATT
ACATTAACCA AAAGAGGCAA TGGTACCGCA TCAGAGACTG CATTGGCAGG CTTTCCGCAT
CATTCACTTG ACACATATTT ACCCCGCCTG GTGCGTTCCG GATTGCGTGT AGCAATTTGT
GATCAGCTGG AGGATCCTAA ATCTGTAAAA GGCATTGTTA AACGTGGTGT AACAGAACTG
GTAACGCCCG GCGTTTCATT TAATGACCAT GTACTCGACG TAAGTAAGAA CAATTATCTG
GCTGCGATTC ATTTTCAAAA AGACTCACTC GGAATTTCTT TTCTGGATAT TTCAACGGGT
GAGTTTTTAA CAGCGCAAGG CGATAGACAT TATATCGATA AACTTCTGCA GAGTTTTTCA
CCGTCTGAAG TATTGTTCTG TAAACAAAAG AAAGAAGTAT TTATTGAATA CTTTGGTGAC
AGATACAATA CCTATGCACT TGAAGACTGG ATTTTTGCGT ATGATTTCAC CTATGATTTA
TTAATTCGTC ATTTTCAAAC AACTTCACTA AAAGGCTTTG GTATTGAAGA AATGCTGGAA
GGCATAACAT CTGCCGGTGC TATTCTTCAT TATTTGAATG AAACAGAACA CAAAGAAGTT
GCTCATATTA CGCGTGTAAA CAGAATTGAA GAAGAACGTT ATGTATGGCT GGATCGTTTT
ACCATCCGCA ACCTGGAACT TGTAAATGCG CAGCAGCTGG AAGGTGTTCC ACTGATCGAA
ATTCTGGATC ATACAAAGAC ACCGATGGGC GCGCGCTTAT TGAAAAAGTG GCTGATTCTT
CCATTAAAAG AATTAACACC CATACAGGAA CGTTTGGATA CGGTAGAGCT TCTGGTTAAA
AATAAAGAGC TGACGACAAC ATTGGTTGAC GAGCTCAAAC CAATAGGAGA CCTTGAACGA
CTGATCTCTA AAGTGGCTGC ACGCAGGGTG AATCCAAGGG AAATGGTTCA GTTAAAGCGT
TCGCTGGAAC GTTTGGTTCC GATACAGCAG CTACTTAAAC AGCAAGATCA GCATGTTCTG
TTAAAATTAG CAGAGCAGAT AAACCCGTGT GAATACTTGG CCGGCAGAAT TCTGAACATG
CTTAAAGAAG ATGCACCGAT GCTTACCAAT CAGGGGAGAA TCATTCGTGA TGGCTGTAAT
GCAGAACTGG ACGAGCTTCG TGCAATTGCA TATACAGGTA AAGACTATCT GCTGCAGATA
CAGCAAAGAG AGATCGAACG TACAGGAATC AGTTCATTAA AAATATCATA CAATAAAGTT
TTCGGATATT ATCTTGAAGT AACAAATACA CATAAAGAAA AAGTGCCTGC AGATTGGATT
CGTAAACAAA CGTTGACAGG TGCAGAGCGT TACATTACAG AAGAACTAAA GATCTACGAA
GAGAAAATTT TAGGTGCTGA AGACAAGATC AATGTAATCG AACAAAAAAT GTTTCAGGAC
CTTGTACTTG AAGCAGAAAG TTATATAAAT CCAATCTTAC AGAATGCCCG CATAGTTGCT
CAGATAGATT GTTTGTGTTC GTTTGCTCAT GCTGCTGTTG CTAATAACTA TTGCAAACCA
ATTGTTGAAG ACAGCGCATT GATTAATATT AAAGCCGGTC GCCATCCGGT GATTGAAAAA
CAATTGCCGT TGGGGGAGAG CTATATTCCC AATGATATTT ATCTGGATGA TGAGACGCAG
CAGGTGATGA TCATTACTGG TCCCAACATG GCCGGTAAAT CTGCCTTGCT CCGGCAAACA
GCATTGATTG TGCTGATGGC ACAGGCAGGC AGTTTTGTTC CGGCAACACA TGCTACCATC
GGTACGGTTG ATAAAGTATT TACACGTGTA GGTGCTTCAG ATAACCTTTC AAAAGGCGAA
TCAACATTCA TGGTTGAAAT GAATGAAACA GCAAGCATCT TAAATAATCT AAGTGGTAGA
AGTCTGGTAT TGATGGATGA AATCGGCCGT GGTACCAGCA CGTATGATGG AATCTCCATT
GCCTGGGCCA TTGTTGAACA TTTGCATAAC CATCCGAACT TCAGGCCAAA GACATTGTTT
GCAACGCACT ATCACGAATT GAATCAATTA ACAGAAGATT TAAAACGGGT TAAAAATTTC
AATGTGTCTG TAAAAGAAGC CGGCAACAAG GTTATATTTA TGCGTACACT GAAGCCGGGC
GGCAGTGAAC ATAGCTTTGG TATTCATGTT GCACAGATGG CCGGCATGCC AACAAGCCTG
GTACTGAGAG CAAATGAGAT CATGGGACAT TTAGAAAAAG AGCATGTACG TGAAGGGCAT
GAAGATAAAT TAAAAGAAGT GCCGAAGTCG ACCCTGCAAA TGAGTTTGTT TGAAGCAGCA
GATCCGGCGT GGGATTCCAT AAAAAAAATA TTAACGCAAA CAGATGTGAA TATAATGTCC
CCTGTAGAAG CTCTTTTAAA ATTGAATGAA CTAAAACAGC TAATTAAATA G
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| Protein sequence | MKQYNAIKGK YPGALLLFRV GDFYETFSED AIKASKVLGI TLTKRGNGTA SETALAGFPH
HSLDTYLPRL VRSGLRVAIC DQLEDPKSVK GIVKRGVTEL VTPGVSFNDH VLDVSKNNYL
AAIHFQKDSL GISFLDISTG EFLTAQGDRH YIDKLLQSFS PSEVLFCKQK KEVFIEYFGD
RYNTYALEDW IFAYDFTYDL LIRHFQTTSL KGFGIEEMLE GITSAGAILH YLNETEHKEV
AHITRVNRIE EERYVWLDRF TIRNLELVNA QQLEGVPLIE ILDHTKTPMG ARLLKKWLIL
PLKELTPIQE RLDTVELLVK NKELTTTLVD ELKPIGDLER LISKVAARRV NPREMVQLKR
SLERLVPIQQ LLKQQDQHVL LKLAEQINPC EYLAGRILNM LKEDAPMLTN QGRIIRDGCN
AELDELRAIA YTGKDYLLQI QQREIERTGI SSLKISYNKV FGYYLEVTNT HKEKVPADWI
RKQTLTGAER YITEELKIYE EKILGAEDKI NVIEQKMFQD LVLEAESYIN PILQNARIVA
QIDCLCSFAH AAVANNYCKP IVEDSALINI KAGRHPVIEK QLPLGESYIP NDIYLDDETQ
QVMIITGPNM AGKSALLRQT ALIVLMAQAG SFVPATHATI GTVDKVFTRV GASDNLSKGE
STFMVEMNET ASILNNLSGR SLVLMDEIGR GTSTYDGISI AWAIVEHLHN HPNFRPKTLF
ATHYHELNQL TEDLKRVKNF NVSVKEAGNK VIFMRTLKPG GSEHSFGIHV AQMAGMPTSL
VLRANEIMGH LEKEHVREGH EDKLKEVPKS TLQMSLFEAA DPAWDSIKKI LTQTDVNIMS
PVEALLKLNE LKQLIK
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