| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0134 |
|---|
| Symbol | |
|---|
| ID | 4184075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 159462 |
|---|
| End bp | 160886 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638070137 |
|---|
| Product | thiol-disulfide isomerase |
|---|
| Protein accession | YP_676767 |
|---|
| Protein GI | 110636560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00111234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.144049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGA TTAAAACACC TTTGCTATTC TTATTGATTG CATTTTCAAG CATCTTTCAG
TCCTTTAGCG CTGGCAAACC CCTAGGTTAT GAAATCAAGG CAACGATTAA AGGCGTTAAA
CAAGCTGATA CGGTATATCT CGCACGCTAT TATGCCGACA AGCGTTTTTA CCAGGATACG
GCTATTGCTG ATGCAAAAGG GTTTGTTTCA TTTTCAGATA CAACACACCT GAAAGAAGGG
ATGTATTTCC TTTTGTTGCC CGGACAGAAG GTTTTCGATT TTATTTTAAA TCCGTCAACG
CTATCTTTTT CTATTGACAC AACGAATCTG ATAAAGTCTG CGCATTTCAA AAATTCTCCG
GACAATACAG CATTTTATGA TTATCAGCGT TTTTTTATGA ATCAAAAAAC AAAAGCTGAT
TCTATAAATA ATTTAATGAA GTCTGCTGCT GCAACGCAAA AAACTGTACT CACAAAGCAA
TTGTCTGATA TAGATTCTAC TATGCTTGCA TATATACAGA ATTTTCTGAA AACGAATCCG
AATAGCTTGT TCACAGCCAT TTTGAAAACG ACAAAAGATG TCGATGTCCC ACCTGCTCCC
AAAAAAGCTG ATGGCTCCAT TGATTCAAGC TGGCAATTTC ATTATTATAA AAAACATTAT
TTTGACAATG TAAATTTTAG CGACGACCGC TTGATCCGTA CACCGGTACT TGTAAATAAG
GTTGATGGCT ATTTTAAAAA TCTTGTTGTT CAACGTCCTG ATTCAATTAT TAAAGAAATT
GATATGATCA TAAGCAAGTG TAACCCAAAA GGGGACTTGT TTGAATATTA TGTACGTGAG
TATACCTATA AATATGAGAC CTCTCAGGTA ATGGGCATGG ATGCTGTATT TGTACACCTG
GGGAAAGAAT ACTATATGAA AGGCAAGTGT TTTTGGGCGA CTCCGGAAAC AGTAAAGAAA
ATTAAAGAAC GTGTTGATTT ATTAGATCCG TTATTGCTTG GCAAGAAAGC TCCCAATCTT
TACATGACCG ATACTACGGG CACGTACCGT TACCTGTATG ATGTACAGGC AAAGTATACC
ATCCTATTCT TTTGGGATTC TCAATGCGGA CACTGTCAGC AGGAAACGCC AAAACTTTAC
GACTGGTGGT TAAAGAACCG TGCAAAAGGC ATTCAGGTAT ATGCTGCAAA CATTGAACGC
AAAGACGAAG AATGGTTGAA ATTTATCCGT TCAAAAAAAA TCGGAGGGTG GTTAAACGTG
CGTGACTCTA AAAACCACAC AGACTTTAAG ATCACGTATG ATATCTATGC AACACCTGTA
TTATATGTAT TGGACAAAAA TAAAGTGATT ATTGCTAAAC GTATCGGTTA TGAAAACCTA
GACGATTTTT TAGTTCAATA TGAAAAAAGC TTAAAAACGA AATAA
|
|---|
| Protein sequence | MNSIKTPLLF LLIAFSSIFQ SFSAGKPLGY EIKATIKGVK QADTVYLARY YADKRFYQDT
AIADAKGFVS FSDTTHLKEG MYFLLLPGQK VFDFILNPST LSFSIDTTNL IKSAHFKNSP
DNTAFYDYQR FFMNQKTKAD SINNLMKSAA ATQKTVLTKQ LSDIDSTMLA YIQNFLKTNP
NSLFTAILKT TKDVDVPPAP KKADGSIDSS WQFHYYKKHY FDNVNFSDDR LIRTPVLVNK
VDGYFKNLVV QRPDSIIKEI DMIISKCNPK GDLFEYYVRE YTYKYETSQV MGMDAVFVHL
GKEYYMKGKC FWATPETVKK IKERVDLLDP LLLGKKAPNL YMTDTTGTYR YLYDVQAKYT
ILFFWDSQCG HCQQETPKLY DWWLKNRAKG IQVYAANIER KDEEWLKFIR SKKIGGWLNV
RDSKNHTDFK ITYDIYATPV LYVLDKNKVI IAKRIGYENL DDFLVQYEKS LKTK
|
|---|
| |