| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0127 |
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| Symbol | dapF |
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| ID | 4184068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 152059 |
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| End bp | 152844 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638070130 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_676760 |
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| Protein GI | 110636553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.555314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAC CATTTTACAA ATATCAGGGA ACTGGAAATG ATTTCATTAT CATAGATAAC
CGCAGCAATA TCTTTGATAG AGAACGCCGT GATATTGTGG CGCAACTGTG CGACAGAAGA
TTTGGAATCG GTGCAGACGG CTTTATTCTA TTGCAAAATA AAGAAGGGTA TGATTTTGAA
ATGGTTTATT ACAATGCAGA TGGAAACGAA AGTACCATGT GCGGAAATGG TGGCAGATGC
ATTGTTCAGT TTGCTCAGGA CATCGGAGTA ATGAATCTTA CAACACATTT TTTAGCAGTA
GATGGAGTGC ATTATGCATT TATAAAAGAA AAGCTTGTAA ACCTGCAGAT GATGAATGTT
GCCGGAATTG ATACATTGGC AGACGATACA TTCTTTTTAA ATACAGGCTC TCCGCATTAC
GTTAAAAAAG TAGAAAAAAT AGAACAGTTT CCTGTTTTTG AAACAGGAAA ATCAATACGT
TACAGCGATA CATTTGCACC CGGCGGGACA AATGTAAACT TCATGGAAAT GCAGGATAAC
TGGCTTTTTG TACGTACATA CGAGCGTGGT GTTGAAAACG AAACATATTC CTGCGGAACC
GGTGTAACAG CCGCTGCAAT TGCTGCAGAG AAGCTTGGCA TAGCACCTCA GTATGTTTTA
ATTAAAACAC TGGGGGGTGA ATTAGAGGTA ACTTTTATTA AAAAAAGCGA CGGGAGCTAT
AAAGATGTAT TCTTGATCGG GCCTGCTAAA AGAGTATTTA CAGGGGAAAT AGAGGTTGAT
TTTTAA
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| Protein sequence | MKIPFYKYQG TGNDFIIIDN RSNIFDRERR DIVAQLCDRR FGIGADGFIL LQNKEGYDFE
MVYYNADGNE STMCGNGGRC IVQFAQDIGV MNLTTHFLAV DGVHYAFIKE KLVNLQMMNV
AGIDTLADDT FFLNTGSPHY VKKVEKIEQF PVFETGKSIR YSDTFAPGGT NVNFMEMQDN
WLFVRTYERG VENETYSCGT GVTAAAIAAE KLGIAPQYVL IKTLGGELEV TFIKKSDGSY
KDVFLIGPAK RVFTGEIEVD F
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