Gene CHU_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0121 
Symbol 
ID4184062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp144969 
End bp145721 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content38% 
IMG OID638070123 
Productb-glycosyltransferase 
Protein accessionYP_676754 
Protein GI110636547 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.356789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA ATAAAAAGAT TGTAGTCGTA ATGCCTGCAT ACAATGCAGC CAAAACTGTT 
GAACAAACAT TTAAAGAGAT CCCGTTTAAC ATTGTTGATG AAGTTATCCT TGTTGATGAC
CACTCAAAAG ATGAAACGTT TGAAGTTGCA AAAAAGTTAG GCATTCACAC TGTAATTCGT
CATGATAATA ATAAAGGTTA TGGCGGAAAC CAAAAAACAT GCTACGATGC TGCCTTGAAA
AACGGTGCAG ATATCGTAGT GATGCTTCAC CCCGACTATC AATATACACC TTTATTATTG
GAAGCAATGA TCTATCCGAT AGCCCGTGGT TTATTTCCTG TAATGCTTGG CTCAAGAATT
TTAGGTAAAG GTGCGCTTCG TGGTGGTATG CCTATGTACA AATACATTTC AAACCGTTTC
CTGACTTTTT TCCAGAATGT AATGATGGGG CAAAAACTTG CTGAATATCA TACAGGATAC
CGGGCTTTCA GTAAAGAAAT TTTAGAGCGC CTACCTTTAC ATAAAAATTC GGATGATTTT
GTGTTCGACA ATGAGATGTT AGGTCAGATT GCTTATGCCG GATATGAAAT GGGTGAAGTA
ACTTGCCCGA CAAAATACTT TGACGATGCA AGCAGCATTA ACTTTAAGCG CAGCGTTCAG
TATGGTTTAG GGGTATTAAG GGTTTCGTTA TCATACAGAT TACAACGCTG GGGGATTGCG
AAATTCGAAA TCTTTGAAGG CATAAAAAAA TAA
 
Protein sequence
MIDNKKIVVV MPAYNAAKTV EQTFKEIPFN IVDEVILVDD HSKDETFEVA KKLGIHTVIR 
HDNNKGYGGN QKTCYDAALK NGADIVVMLH PDYQYTPLLL EAMIYPIARG LFPVMLGSRI
LGKGALRGGM PMYKYISNRF LTFFQNVMMG QKLAEYHTGY RAFSKEILER LPLHKNSDDF
VFDNEMLGQI AYAGYEMGEV TCPTKYFDDA SSINFKRSVQ YGLGVLRVSL SYRLQRWGIA
KFEIFEGIKK