Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0121 |
Symbol | |
ID | 4184062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 144969 |
End bp | 145721 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070123 |
Product | b-glycosyltransferase |
Protein accession | YP_676754 |
Protein GI | 110636547 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.356789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA ATAAAAAGAT TGTAGTCGTA ATGCCTGCAT ACAATGCAGC CAAAACTGTT GAACAAACAT TTAAAGAGAT CCCGTTTAAC ATTGTTGATG AAGTTATCCT TGTTGATGAC CACTCAAAAG ATGAAACGTT TGAAGTTGCA AAAAAGTTAG GCATTCACAC TGTAATTCGT CATGATAATA ATAAAGGTTA TGGCGGAAAC CAAAAAACAT GCTACGATGC TGCCTTGAAA AACGGTGCAG ATATCGTAGT GATGCTTCAC CCCGACTATC AATATACACC TTTATTATTG GAAGCAATGA TCTATCCGAT AGCCCGTGGT TTATTTCCTG TAATGCTTGG CTCAAGAATT TTAGGTAAAG GTGCGCTTCG TGGTGGTATG CCTATGTACA AATACATTTC AAACCGTTTC CTGACTTTTT TCCAGAATGT AATGATGGGG CAAAAACTTG CTGAATATCA TACAGGATAC CGGGCTTTCA GTAAAGAAAT TTTAGAGCGC CTACCTTTAC ATAAAAATTC GGATGATTTT GTGTTCGACA ATGAGATGTT AGGTCAGATT GCTTATGCCG GATATGAAAT GGGTGAAGTA ACTTGCCCGA CAAAATACTT TGACGATGCA AGCAGCATTA ACTTTAAGCG CAGCGTTCAG TATGGTTTAG GGGTATTAAG GGTTTCGTTA TCATACAGAT TACAACGCTG GGGGATTGCG AAATTCGAAA TCTTTGAAGG CATAAAAAAA TAA
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Protein sequence | MIDNKKIVVV MPAYNAAKTV EQTFKEIPFN IVDEVILVDD HSKDETFEVA KKLGIHTVIR HDNNKGYGGN QKTCYDAALK NGADIVVMLH PDYQYTPLLL EAMIYPIARG LFPVMLGSRI LGKGALRGGM PMYKYISNRF LTFFQNVMMG QKLAEYHTGY RAFSKEILER LPLHKNSDDF VFDNEMLGQI AYAGYEMGEV TCPTKYFDDA SSINFKRSVQ YGLGVLRVSL SYRLQRWGIA KFEIFEGIKK
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