Gene CHU_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0090 
Symbol 
ID4185999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp107050 
End bp108444 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content38% 
IMG OID638070090 
Producthypothetical protein 
Protein accessionYP_676724 
Protein GI110636517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00690721 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA CAGTTAAAAG TATTTTATAC ATCTTGTTAG CAGCAGCATT TGTTGTTACA 
TCTTGTAAAG ACAAAAAAGA TGATCCGGCT CCTTCAAATG GCGGAAATAC AAATGTTGAA
GTGATAGAAG GTGAAATTTC TTCCGATAAA ACATTAGATG CATCAAAAAA ATATCTGTTA
AAAGGTAAAG TATATGTATT GTCTGGTCAC AAAATTGTAA TCCCTGCTGG TACAGTAATA
TTTGGCGATA AAACTACACA AGGCGCTTTA ATCATTAACA GAGGCGCTAA AATCGAAGCA
GTTGGAACAG CTTCAAATCC TATCGTATTC ACGTCTAACG CACCTGCAGG TTACAGACAA
AGAGGTGACT GGGCTGGTAT TGTAATTTGT GGAAATGCAC AAACTAACAA AGGTTCAAAC
AATCCGATTG AAGGTATTCA GGGCACAGGT GGTGTTAACG GTTACTATGG TCCGAATGGC
GCTACTCCGG ATAATACACA GAATTCAGGA ACAATGAAAT TTGTTCGTAT TGAATATGCT
GGTTTCCCTC TTTCTGATGA CAATGAATTG AATTCATTAA CATTTGGTTC TGTAGGAAGC
GGAACAACAA TTGAAAACAT CATGGTTTCT TATGCAAATG ATGATGCGTA TGAATGGTTC
GGTGGAACGA TTAATCACAA ATACCTTATT GCTTACAGCA CAATTGATGA TGACTTTGAT
ACAGATGCCG GTTATTCAGG AAGTATCCAA TACGGTTTAG TTGTAAGAGA TAACAACATT
GCGGATAAAT CAACTTCAAG AGCATTTGAA TCTTCTTCAA ACGCTACAGG TGCTGATCCG
GATTCTGAAT GTAAATTTGC AAACTTTACA ATTCTTGGTC CATGGATCTA TGCAGATACT
TCATCAACAG CTAACATTGC AGCAAGCTTT GGTAACGCTA TTGAGATCAA CACAAGCTCA
AACATCAAAG TTTGGAACTC AATGATCTTA GGTTTCACAG TTCCTGTAAA CATGAACGGT
GGCGATAACT CTGAAGTTAA AAACAACATT TTATATGGCC GCGATTCATT AGTTGTTAAA
ACTGCCAATG CTAAAGGGAC ATTTGCTGAC AACACAGTGA TCACCAGCAG AATCTTAAAA
TCTATCTATG GTACCTCAGT ATTCACAGGT AAAGATTCTA AGAAAAATAA ATCTGAATCT
TCAAGTGCAT TGTATTTCAA CAATCCAAAT CCACTTCAGG CAGCAGGTTC TCCTTATGCT
ACAGGAGCTC CAAGCTTAGC TGCAAGCGGA TTTACAGCTG AAAGTTATTA TGGCGCATTT
GGTACTACTG CTAATGCAGG TTGGGCATGG GGCCAGGCTT GGATTAACTT CGCACCAAAT
AACACAGCAT ACTAA
 
Protein sequence
MKKTVKSILY ILLAAAFVVT SCKDKKDDPA PSNGGNTNVE VIEGEISSDK TLDASKKYLL 
KGKVYVLSGH KIVIPAGTVI FGDKTTQGAL IINRGAKIEA VGTASNPIVF TSNAPAGYRQ
RGDWAGIVIC GNAQTNKGSN NPIEGIQGTG GVNGYYGPNG ATPDNTQNSG TMKFVRIEYA
GFPLSDDNEL NSLTFGSVGS GTTIENIMVS YANDDAYEWF GGTINHKYLI AYSTIDDDFD
TDAGYSGSIQ YGLVVRDNNI ADKSTSRAFE SSSNATGADP DSECKFANFT ILGPWIYADT
SSTANIAASF GNAIEINTSS NIKVWNSMIL GFTVPVNMNG GDNSEVKNNI LYGRDSLVVK
TANAKGTFAD NTVITSRILK SIYGTSVFTG KDSKKNKSES SSALYFNNPN PLQAAGSPYA
TGAPSLAASG FTAESYYGAF GTTANAGWAW GQAWINFAPN NTAY