Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0090 |
Symbol | |
ID | 4185999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 107050 |
End bp | 108444 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070090 |
Product | hypothetical protein |
Protein accession | YP_676724 |
Protein GI | 110636517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00690721 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA CAGTTAAAAG TATTTTATAC ATCTTGTTAG CAGCAGCATT TGTTGTTACA TCTTGTAAAG ACAAAAAAGA TGATCCGGCT CCTTCAAATG GCGGAAATAC AAATGTTGAA GTGATAGAAG GTGAAATTTC TTCCGATAAA ACATTAGATG CATCAAAAAA ATATCTGTTA AAAGGTAAAG TATATGTATT GTCTGGTCAC AAAATTGTAA TCCCTGCTGG TACAGTAATA TTTGGCGATA AAACTACACA AGGCGCTTTA ATCATTAACA GAGGCGCTAA AATCGAAGCA GTTGGAACAG CTTCAAATCC TATCGTATTC ACGTCTAACG CACCTGCAGG TTACAGACAA AGAGGTGACT GGGCTGGTAT TGTAATTTGT GGAAATGCAC AAACTAACAA AGGTTCAAAC AATCCGATTG AAGGTATTCA GGGCACAGGT GGTGTTAACG GTTACTATGG TCCGAATGGC GCTACTCCGG ATAATACACA GAATTCAGGA ACAATGAAAT TTGTTCGTAT TGAATATGCT GGTTTCCCTC TTTCTGATGA CAATGAATTG AATTCATTAA CATTTGGTTC TGTAGGAAGC GGAACAACAA TTGAAAACAT CATGGTTTCT TATGCAAATG ATGATGCGTA TGAATGGTTC GGTGGAACGA TTAATCACAA ATACCTTATT GCTTACAGCA CAATTGATGA TGACTTTGAT ACAGATGCCG GTTATTCAGG AAGTATCCAA TACGGTTTAG TTGTAAGAGA TAACAACATT GCGGATAAAT CAACTTCAAG AGCATTTGAA TCTTCTTCAA ACGCTACAGG TGCTGATCCG GATTCTGAAT GTAAATTTGC AAACTTTACA ATTCTTGGTC CATGGATCTA TGCAGATACT TCATCAACAG CTAACATTGC AGCAAGCTTT GGTAACGCTA TTGAGATCAA CACAAGCTCA AACATCAAAG TTTGGAACTC AATGATCTTA GGTTTCACAG TTCCTGTAAA CATGAACGGT GGCGATAACT CTGAAGTTAA AAACAACATT TTATATGGCC GCGATTCATT AGTTGTTAAA ACTGCCAATG CTAAAGGGAC ATTTGCTGAC AACACAGTGA TCACCAGCAG AATCTTAAAA TCTATCTATG GTACCTCAGT ATTCACAGGT AAAGATTCTA AGAAAAATAA ATCTGAATCT TCAAGTGCAT TGTATTTCAA CAATCCAAAT CCACTTCAGG CAGCAGGTTC TCCTTATGCT ACAGGAGCTC CAAGCTTAGC TGCAAGCGGA TTTACAGCTG AAAGTTATTA TGGCGCATTT GGTACTACTG CTAATGCAGG TTGGGCATGG GGCCAGGCTT GGATTAACTT CGCACCAAAT AACACAGCAT ACTAA
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Protein sequence | MKKTVKSILY ILLAAAFVVT SCKDKKDDPA PSNGGNTNVE VIEGEISSDK TLDASKKYLL KGKVYVLSGH KIVIPAGTVI FGDKTTQGAL IINRGAKIEA VGTASNPIVF TSNAPAGYRQ RGDWAGIVIC GNAQTNKGSN NPIEGIQGTG GVNGYYGPNG ATPDNTQNSG TMKFVRIEYA GFPLSDDNEL NSLTFGSVGS GTTIENIMVS YANDDAYEWF GGTINHKYLI AYSTIDDDFD TDAGYSGSIQ YGLVVRDNNI ADKSTSRAFE SSSNATGADP DSECKFANFT ILGPWIYADT SSTANIAASF GNAIEINTSS NIKVWNSMIL GFTVPVNMNG GDNSEVKNNI LYGRDSLVVK TANAKGTFAD NTVITSRILK SIYGTSVFTG KDSKKNKSES SSALYFNNPN PLQAAGSPYA TGAPSLAASG FTAESYYGAF GTTANAGWAW GQAWINFAPN NTAY
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