Gene CHU_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0083 
SymbolpyrR 
ID4185992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp98891 
End bp99430 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content43% 
IMG OID638070083 
Producturacil phosphoribosyltransferase; pyrimidine operon attenuation protein 
Protein accessionYP_676717 
Protein GI110636510 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0551388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC GCATTATAAT CGACAACGAT TTGCTGCAGG TCATGTTGGA TCGGCTTTGT 
CAGCAATTGA TCGAGTCCCA CGACGATTTC TCCAATACTG TTATTTTAGC CCTTCAGCCC
AGAGGAGTTG CTACAGGGCA GCGTATTCAT AAAAAATTAG AAAAGGCTAC AAAAAAGAAG
ATCAATCTGG GCTACCTGGA TGCGACTTTT TTCAGAGATG ATTTCAGAAG ACACGATGGT
CCGTTGAGAG CAAACGCTAC AAAAATTCCG TTTCTGATTG AAGGGAAACG TGTGATCCTG
GTGGACGATG TATTATACAC CGGCCGCACG GTGCGCGCTG CAATGGATGC CATGATGGCT
TTTGGCAGGC CGAAAGATGT AGAGCTGTTG GTAGTGATTG ATCGCAAGTA CAGTCGTGAT
GTGCCGATTC AGCCCAATTA TGTAGGGAGA GAAGTTATTT GTCTGGAATC TGAAAAAGTA
GTTGTAGACA TTAACGAAGT TGAAGATAAG AAAGAATTAA TCTGGTTAGT AAAGAAATAA
 
Protein sequence
MSKRIIIDND LLQVMLDRLC QQLIESHDDF SNTVILALQP RGVATGQRIH KKLEKATKKK 
INLGYLDATF FRDDFRRHDG PLRANATKIP FLIEGKRVIL VDDVLYTGRT VRAAMDAMMA
FGRPKDVELL VVIDRKYSRD VPIQPNYVGR EVICLESEKV VVDINEVEDK KELIWLVKK