Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0083 |
Symbol | pyrR |
ID | 4185992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 98891 |
End bp | 99430 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070083 |
Product | uracil phosphoribosyltransferase; pyrimidine operon attenuation protein |
Protein accession | YP_676717 |
Protein GI | 110636510 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0551388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC GCATTATAAT CGACAACGAT TTGCTGCAGG TCATGTTGGA TCGGCTTTGT CAGCAATTGA TCGAGTCCCA CGACGATTTC TCCAATACTG TTATTTTAGC CCTTCAGCCC AGAGGAGTTG CTACAGGGCA GCGTATTCAT AAAAAATTAG AAAAGGCTAC AAAAAAGAAG ATCAATCTGG GCTACCTGGA TGCGACTTTT TTCAGAGATG ATTTCAGAAG ACACGATGGT CCGTTGAGAG CAAACGCTAC AAAAATTCCG TTTCTGATTG AAGGGAAACG TGTGATCCTG GTGGACGATG TATTATACAC CGGCCGCACG GTGCGCGCTG CAATGGATGC CATGATGGCT TTTGGCAGGC CGAAAGATGT AGAGCTGTTG GTAGTGATTG ATCGCAAGTA CAGTCGTGAT GTGCCGATTC AGCCCAATTA TGTAGGGAGA GAAGTTATTT GTCTGGAATC TGAAAAAGTA GTTGTAGACA TTAACGAAGT TGAAGATAAG AAAGAATTAA TCTGGTTAGT AAAGAAATAA
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Protein sequence | MSKRIIIDND LLQVMLDRLC QQLIESHDDF SNTVILALQP RGVATGQRIH KKLEKATKKK INLGYLDATF FRDDFRRHDG PLRANATKIP FLIEGKRVIL VDDVLYTGRT VRAAMDAMMA FGRPKDVELL VVIDRKYSRD VPIQPNYVGR EVICLESEKV VVDINEVEDK KELIWLVKK
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