| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0080 |
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| Symbol | rfaQ |
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| ID | 4185989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 95542 |
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| End bp | 96516 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070080 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_676714 |
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| Protein GI | 110636507 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.49427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.135541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TAATCCTTCG TTTTTCTTCC ATTGGCGATA TCGTTTTAAC AACGCCGGTT
ATCCGGTGCC TGAAAAAACA AATCCCTAAT GCTGAAATAC ACTTTGCAAC AAAAGCTTCT
TTTAAAAGTA TTTTAGAAAA CAATCCGTAC ATAGACAAGC TGCACCTGCT TGAATCTTCC
ACTGCTTCCT TTATAAAGCA GCTGAAAGCC GAACGGTTTG ATGTTGTGAT TGATTTGCAT
AGCAACATCC GCACAAAACG CATTAAGTGG GCGCTTAAGG CTAAAAGTTT CACGTTCGAT
AAATTAAATA TCCGTAAGTG GTTTTATGTG AATTGGAAAT GGAAAACCAT GCCTGCAATT
CATATTGTGG ATCGGTATTT AGATACTGTC AAACACCTGG GTGTAAAAAA TGACAATGAA
GGCCTGGATT ACTTTATACC GGAAAAAGAT ATTATTTCCA GAGACAGTCT TCCGCAGAAA
TATGCTGCCG GGTATGTTGC TATCGCTATT GGTGCTCAGC ATGCTACCAA GCGGCTGCCG
GAAGCAAAAC TGATTGAACT TATCGGCAAG ATATCCCACC CTATTATTTT ACTTGGCGGA
AAAGATGATA CTGCTACAGC CGCGCGGCTT GTTGCGTATT TCCCGGACAC AAAAAATATT
CTGAATGCCT GCGGCACATA TAATTTAAAC CAATCAGCTT CAATTGTACA TCAGTGCATG
TATCTATACA CACATGATAC CGGCTTAATG CACATCGGTG CAGCACTTCA AAAAAGAATT
ATTTCTATTT GGGGCAACAC AACGCCTGAG TTAGGCATGT ATGCTTATAA AACCGAACAT
GTTAACTGGC AAAAAGAGGA CCTCTATTGC AGGCCTTGTT CGAAAATCGG TTATAACAGC
TGCCCTAAAA AACATTTCAG ATGTATGAAT GAACAGGTTC TTCCTGTTCA TGAAATAGAA
TCCAGATGGA ATTAA
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| Protein sequence | MKILILRFSS IGDIVLTTPV IRCLKKQIPN AEIHFATKAS FKSILENNPY IDKLHLLESS
TASFIKQLKA ERFDVVIDLH SNIRTKRIKW ALKAKSFTFD KLNIRKWFYV NWKWKTMPAI
HIVDRYLDTV KHLGVKNDNE GLDYFIPEKD IISRDSLPQK YAAGYVAIAI GAQHATKRLP
EAKLIELIGK ISHPIILLGG KDDTATAARL VAYFPDTKNI LNACGTYNLN QSASIVHQCM
YLYTHDTGLM HIGAALQKRI ISIWGNTTPE LGMYAYKTEH VNWQKEDLYC RPCSKIGYNS
CPKKHFRCMN EQVLPVHEIE SRWN
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