Gene CHU_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0062 
Symbol 
ID4186381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp75540 
End bp76439 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content38% 
IMG OID638070062 
Productmethyltransferase 
Protein accessionYP_676696 
Protein GI110636489 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.48034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0312794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCGT ACAACCAATC ATCCGTATCA ACACTACAAA CTAAAGAAAG AAAAATTGAT 
GTATTTTCTG TTGAAGGAAA CGTAGACAAT GAAACGGTAA AATCTTTTGG CGAAGAGTGG
ACGGCGTTTG ATTCGTTTAA TGAAACTGAA ATATATAATG CCGGCGATAA CTATTTTGAT
ATTGTACCGG AAACAATATT AAAGCATATA ACAAATGCGC TGGATGTTGG CTGCGGCACA
GGGCGTTGGT CTTATTACCT GTCAGAAAAA GTTGGGTTTA TAGAATGCAT TGATCCCAGT
GAAGCCGTGA TTGCGGCATC TTCATTGCTG TCCGGTAAGA ATAACATCCG TATTTCAAAG
GCAGGTGTTG ACAACATTCC ATTTGCTGAT GGTACATTTG ATTTTGTTTT TAGTCTTGGT
GTTTTGCACC ATGTGCCTGA TACAAAAAAA GCTGTACATG CCTGTGTTCA GAAGTTGAAA
ATGAATGGAC ATATATTGTT ATATCTCTAT TACAATCTGG AAAATCGCGG GCTTATTTTT
AAAACACTTT TTCATTTGTC AAATTCGCTG CGCTGGATGG TAAGCAAACT ACCCGGAGCA
ATTAAGCGGT TCGTTTGCGA TTTGCTTGCT ATAGTAATTT ACATGCCTTT TGTTATCGTA
TCCCGTATAC TGATCAAGTT GAATCTGGCA GCTTCAGTTG TTTCCCGTGT GCCCTTGTCG
TGGTATGCAG ATAAATCATT CAATATAATC CGTAATGATT CATTAGATCG CTTTGGTACG
CCATTGGAAC AACGGTTTTC AAAGCAGCAA ATTACAGACA TGCTTATACA CGCAGGCTGT
ACAGATATTG TGTTTGCTGA TAATGCACCA TTTTGGAGAG TAATCGCTAA AAAGAAATGA
 
Protein sequence
MIPYNQSSVS TLQTKERKID VFSVEGNVDN ETVKSFGEEW TAFDSFNETE IYNAGDNYFD 
IVPETILKHI TNALDVGCGT GRWSYYLSEK VGFIECIDPS EAVIAASSLL SGKNNIRISK
AGVDNIPFAD GTFDFVFSLG VLHHVPDTKK AVHACVQKLK MNGHILLYLY YNLENRGLIF
KTLFHLSNSL RWMVSKLPGA IKRFVCDLLA IVIYMPFVIV SRILIKLNLA ASVVSRVPLS
WYADKSFNII RNDSLDRFGT PLEQRFSKQQ ITDMLIHAGC TDIVFADNAP FWRVIAKKK