Gene CHU_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0056 
Symbol 
ID4186977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp68907 
End bp69461 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content37% 
IMG OID638070055 
Producthypothetical protein 
Protein accessionYP_676690 
Protein GI110636483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.149965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00268422 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCTGCTT TTATGAAAAT TGTAAAAATT GTAGCACTAA GCTTTTTATC TCTTGTAGTA 
CTCACATTTA TATTTGCCTT CTTTGTTGAC GGCCATTACG AAGTATCAAA AAGCATTCTT
ATCAATAGAT CTTCGCCAGA TGTTTTTGCT TATGTTTCTC ACATTAAAAA CCAGGAACAT
TACAGTGTTT GGGCTAAGCG AGACACAAAC AGCATCAAGA CATACAGAGG AAGGGATGGA
GTAGTTGGCT TTACGGCTAC CTGGAAAAGC GAGATGAAAA AAGTTGGACA GGGGGAACAG
GAAATCAAAA AAATCATACC GAATAAACGA ATTGATTTGG AATTAAGATT CTTCAAACCC
TTTGAAGCGA CAGATCATGT TTTCATGGAA ACCATTGCAC AGGATGAAGA AGAAACAAAA
GTAGTCTGGG GCTTTGATGG CGAGATGGCA TATCCTGTAA ATTTCTTTCT GTTGTTTGTA
GACATGGAGG ATGTGCTGGG CGGTGATCTG GAGACAGGAC TTGTAAACTT AAAAACAATT
TTAGAAAGTA AATAG
 
Protein sequence
MSAFMKIVKI VALSFLSLVV LTFIFAFFVD GHYEVSKSIL INRSSPDVFA YVSHIKNQEH 
YSVWAKRDTN SIKTYRGRDG VVGFTATWKS EMKKVGQGEQ EIKKIIPNKR IDLELRFFKP
FEATDHVFME TIAQDEEETK VVWGFDGEMA YPVNFFLLFV DMEDVLGGDL ETGLVNLKTI
LESK