Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0056 |
Symbol | |
ID | 4186977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 68907 |
End bp | 69461 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070055 |
Product | hypothetical protein |
Protein accession | YP_676690 |
Protein GI | 110636483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.149965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00268422 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCTGCTT TTATGAAAAT TGTAAAAATT GTAGCACTAA GCTTTTTATC TCTTGTAGTA CTCACATTTA TATTTGCCTT CTTTGTTGAC GGCCATTACG AAGTATCAAA AAGCATTCTT ATCAATAGAT CTTCGCCAGA TGTTTTTGCT TATGTTTCTC ACATTAAAAA CCAGGAACAT TACAGTGTTT GGGCTAAGCG AGACACAAAC AGCATCAAGA CATACAGAGG AAGGGATGGA GTAGTTGGCT TTACGGCTAC CTGGAAAAGC GAGATGAAAA AAGTTGGACA GGGGGAACAG GAAATCAAAA AAATCATACC GAATAAACGA ATTGATTTGG AATTAAGATT CTTCAAACCC TTTGAAGCGA CAGATCATGT TTTCATGGAA ACCATTGCAC AGGATGAAGA AGAAACAAAA GTAGTCTGGG GCTTTGATGG CGAGATGGCA TATCCTGTAA ATTTCTTTCT GTTGTTTGTA GACATGGAGG ATGTGCTGGG CGGTGATCTG GAGACAGGAC TTGTAAACTT AAAAACAATT TTAGAAAGTA AATAG
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Protein sequence | MSAFMKIVKI VALSFLSLVV LTFIFAFFVD GHYEVSKSIL INRSSPDVFA YVSHIKNQEH YSVWAKRDTN SIKTYRGRDG VVGFTATWKS EMKKVGQGEQ EIKKIIPNKR IDLELRFFKP FEATDHVFME TIAQDEEETK VVWGFDGEMA YPVNFFLLFV DMEDVLGGDL ETGLVNLKTI LESK
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