| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0054 |
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| Symbol | atoC |
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| ID | 4186975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 66879 |
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| End bp | 67304 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638070053 |
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| Product | response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS) |
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| Protein accession | YP_676688 |
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| Protein GI | 110636481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00225376 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TGGAAACAGC CGTGGACACC AAATACCATT CAATCATGCT TGTCGATGAT
AATGAAATCG ACAACTTAAT AAATCAAAAA ATGATTGAAG CAGCCGGCAT ATGTACGCAT
ATATTTGTTC ACTCTGGTGC AAGAAGCGCC ATTGAATTTT TGAAAAATAT AGAGAAACTT
GCTAAAGGGT CATTGGATTT GTATTTGCCG GATTTGATTT TTCTTGACAT TGATATGCCT
TTAATGGACG GCTTTCAATT TTTAGAAGAG TTTGAAAAAA TGTCTGATCT GATAAAAGAT
CAATGCAACG TAATCATGCT TACATCCTCA CTGAATCCAC AGGATTTAAT GAAGGCAAAA
AAGAATAAAC ACATCATTAA ATACATCAAC AAACCATTGA CCCTGGATAA TCTAAGAAAG
ATTTAA
|
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| Protein sequence | MKNMETAVDT KYHSIMLVDD NEIDNLINQK MIEAAGICTH IFVHSGARSA IEFLKNIEKL
AKGSLDLYLP DLIFLDIDMP LMDGFQFLEE FEKMSDLIKD QCNVIMLTSS LNPQDLMKAK
KNKHIIKYIN KPLTLDNLRK I
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