| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0032 |
|---|
| Symbol | iap |
|---|
| ID | 4183681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 40501 |
|---|
| End bp | 41685 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638070030 |
|---|
| Product | aminopeptidase |
|---|
| Protein accession | YP_676666 |
|---|
| Protein GI | 110636459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0112983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0236971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAAA CAATCACAAC ATTAACGTCA AAAACATATC ATGGACGCGG TGCTGCCAGC
AATGGCGATG GATTAGCCGC TGCATACCTG GAAAAACAAT ATAAAGAAAC AGGTTTAAAA
CCAGTCGACA CGAACTTCTT GCAGCCATTC ACCTATGCAA TAAATACGTT TCCGGGCAAA
ATGAAATTGA AATCGAACCT GGGTGTTTTT AAACCGGGGA TAGATTATAT TGTCAAATCA
ACGAGCGGTC CAGGCAAAGG TACATGCGAT GTGTATCTGG TCGACACATT GATTTTTACA
GATGATGGTA AATTAAAAGA ATTTCTTCAG CTGGATGTGA CTGCATTGGT AGTGGTATAT
CCGAAAAAAT ATTTTAAAGA GTTTACCGCT TCAACCCCCG ATTTATTAAA GCAGCTGTAT
TCAGCAGCAG CCATCATTGA ATTGCAGGAT AAGAAACTGA CCATGGCATT GGCAGATCAA
TCGTTTGGAA CACCCGTGTT TGAAGTTTTA ACAACGTCGT TTTCTCCCGA TATAAAAACC
ATTTCATTTG AAATTGAAAA TGAACTGATC AAAAAGCATC AGGCAAATAA TGTTATCGGC
ATGATAGAAG GGCGCTCTAA AAAGGATTCC TTTATTGTAC TTACAGCACA TTATGATCAC
CTGGGAACGC TTGGCAGGAA GGCTTATTTT CCTGGTGCCA ATGATAATGC AAGTGGTGTA
AGTATGTTGC TGGAGTTTGC GCATTATTAC ATGGAAAACC CGCCGGAATA TTCCATGCTG
TTTATTGCTT TTGCCGGTGA AGAGTCCGGT TTACTTGGCT CGTCGTATTT TGTAGCGCAT
CCATTGGTTC CATTAGCCGG CATTCATTTC CTGATTAATC TGGATCTGTT GGGAACAGGG
GATGATGGCA TTATGGTTGT AAACGGAAGT GTATTTAAAC CCGCTTACAA CAGACTTATA
GCCATCAATG AAGAGAAAAA GCTGTTGCCT GCTATTAAGA TGCGTGGCGA GGCAGCTAAT
TCCGATCACT ATCCATTTTA TAAAAAAGGT GTTCCGTGTT TTTTTATTTA CACCTTGGGC
GGAGTCGCAG CTTACCATGA TGTACAGGAT GTTGCAAAGA CATTGCCGCT GACGAAGTAT
AGGGAAGTGT TTCAGCTGAT TGTTTTGTTC AACGGTGAAA AATGA
|
|---|
| Protein sequence | MQKTITTLTS KTYHGRGAAS NGDGLAAAYL EKQYKETGLK PVDTNFLQPF TYAINTFPGK
MKLKSNLGVF KPGIDYIVKS TSGPGKGTCD VYLVDTLIFT DDGKLKEFLQ LDVTALVVVY
PKKYFKEFTA STPDLLKQLY SAAAIIELQD KKLTMALADQ SFGTPVFEVL TTSFSPDIKT
ISFEIENELI KKHQANNVIG MIEGRSKKDS FIVLTAHYDH LGTLGRKAYF PGANDNASGV
SMLLEFAHYY MENPPEYSML FIAFAGEESG LLGSSYFVAH PLVPLAGIHF LINLDLLGTG
DDGIMVVNGS VFKPAYNRLI AINEEKKLLP AIKMRGEAAN SDHYPFYKKG VPCFFIYTLG
GVAAYHDVQD VAKTLPLTKY REVFQLIVLF NGEK
|
|---|
| |