Gene CHU_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0031 
Symbol 
ID4183680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp40004 
End bp40426 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content40% 
IMG OID638070029 
Productintegral membrane protein 
Protein accessionYP_676665 
Protein GI110636458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0727077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0186699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGC CTATACAACA CTGGTTGGTG CTTAACACAA ATCACATACG ATTCCTCAGA 
ATATACGGCC CTGCTGTAGT CTGGGGAATT TTTATTTTAA TCGCGACCTT AACACCCGGA
AGGTCGCTTC CTTCCAGCTC ACTGTTTCGG TTTGATAAAC TGATTCACGT TATTATTTTT
GGCGTATTTG CCTGGCTTGT TTTAAGAGCG TTGTATTTAT CCGGACGCTT GACTCCAGAA
AACAGTTTTC GTATATATAT ACTCGTTGCA AGCGTAACAA TCGTTTTCGG AATTGCTATA
GAATTAATGC AGCAGCTTAT TCCTGACAGA GGTGCAGACA TAAACGATGT GATTGCAAAT
ACTACAGGAA TCATTCTGGC GCAGTTGATT TTTTATTTTA CTCATCGGAA AAAACAAGTA
TGA
 
Protein sequence
MQPPIQHWLV LNTNHIRFLR IYGPAVVWGI FILIATLTPG RSLPSSSLFR FDKLIHVIIF 
GVFAWLVLRA LYLSGRLTPE NSFRIYILVA SVTIVFGIAI ELMQQLIPDR GADINDVIAN
TTGIILAQLI FYFTHRKKQV