| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0029 |
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| Symbol | sprA |
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| ID | 4183678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 32455 |
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| End bp | 39597 |
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| Gene Length | 7143 bp |
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| Protein Length | 2380 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070027 |
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| Product | gliding motility-related protein |
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| Protein accession | YP_676663 |
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| Protein GI | 110636456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.102212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCAA GGAAAAAATT CATACTACCG TTATTCGGAG TTTCCCTATT TTTTGTCTTT
TGGGCTGCAT TTTCCAGCAC CCGAGATGGC TCGTATTATT CATTCAAAAA AATATTTACC
CCTGACGATA GTACGAAGAG AATAAAAACA AGAAGGCCTA CGTATCAGAG TGAGGACCGT
GTGGGAGATC AATACAATAA TCCTACAAAT AAATCTCCGC TTGAACTTCA AAATCCGGAT
AACATCACGG AAGAAGTAGA AATAGATACG GCAACAGGCA ATTATATTGT GCGTGAAAAA
ATCGGTGATA TGGAATACCG TACGCAAACA TACCTGACTT TTGAAGAATA TTACAAATAC
AAAAACAAAC AGTTGCTGCG GGATTACTGG CAGAGTAAAG GTAAAACAGA TCCCAATGAT
CCGATGGCAA CCCCTCCGCA AAAACCGGGG CAGCCATTTG GCTTTACAAA ACACATAAAA
GGACTTGAAG GTCCTTTTGG CAGTAACTAT GTAGACATCC GTCCGAGTGG TTTGGTGACA
CTTGACTTTG CAGGCCGTTG GCAGCGGGTG AATAACCCGG CTTTGCCGAT TAAACAGCAA
CGGAATGGTT TGTTTGATTT TGATCAGCAG ATCAGTATGA ATGTGATCGG TAAAATTGGT
GAGAAGCTGA AACTGACCGT GAACTGGGAT ACCAAGGCCG CTTTTGAATT TCAAAACAGT
GTTAAGATTC AATACACGGC ATTTGAAGAA GATATTATTC AGGCAATCGA AGTTGGCCGG
ATCAATATGC CTCTGAATTC CTCTTTAATG ACAGGCCCTC AGAATTTGTT CGGTTTAAAA
ACCAAATTGC AATTCGGCAG ATTGTCTGTA ACAGCAGTAG CAGCAAGACA GGATGGTAAA
TTAGATGAAA TCAAAATAGG CGGCGGCGGC CAGGGGCGCA CCTTTGAAAT TAAAGGTGAT
GCATACGAGC CCTACAGACA CTTTTTCCTT GGACAGTTTT TTAGAGAAAA TTATGAAAGA
TCCCTTAAAT CAAGTCCGAC AATATTATCA AACGTACAGA TAAAACGGGT TGAAGTATAC
GTTACAAACA GAAACAATAC AACAGCTAAT TTACGGAATG TAGTAGGTTA TCTGGATTTG
GGAGAGAACG ATTCGCTTTA TCGTAAAAAC CTGACTAAAA ACGTTCCTAC CGATGCTCCT
TTTAATGAAA TTAATAATTT ATATCCGGCC ATTAACGGAT TCAGATCCAT TGAAACACTC
TCTGCAGATG TAGCCACCCT TAATGCAGCC TGCGGATGTA CATTTCAGGA TGGTACCGAT
TATACCTATC TGAAAAGTGC ACGTAAGCTT GCCCCAACCG AATTTACCTT TCATCCGGAC
TTAGGCTATA TCACTCTGCA ATCAAGGTTA ACAGAAGATG TTGCATTATT GGTTGCCTAT
CAATATACGT ATGACGGAAA GGAATATACC GTCGGAGAAC TTTCAGATGA ATATGCCAAC
CTTCCGGAAA ATCAATTGGT ATTTGCCAAA ATGATTAAAC CGCCATTGGT TAAAACTCGA
CTGCCTACGT GGGATCTGAT GATGAAAAAT ATTTATCAGA TTGGAGTAAC TCAAATACAA
CGGGATAATT TTCAGTTCAG AATCATTTAT AAAGATGATG CAACGGGTGC AGATATTCCA
AACCTTCAGG AAGGGACCAA TACCAAAGGT GTTCCCTTAC TTCAGCTGAG TGGAATGGAT
TTATTAAACC CGAACAATGA TCAGGCGCCT GATGGTAACT TTGACTATGT AGAAGGATTA
ACGATCGATT CAAAAAATGG CCGGATCATA TTCCCGGTAC TCGAACCTTT TGGTTCTAAT
CTTGAAAAGT ATTTTCTGCC AACCGAGCAG GCGCTGAAAT CGAAGTATGT ATTTTCGGAG
TTGTATGACT CCACATTTTC AGATGCCCAG CAAATTGCAA GCAAAGACAA ATACTTTTTC
AAAGGAAGGT ATACAGCTGG TACGGCAAGT GAAATCATAT TGCCGGGGAT TAACGTTTCT
CAGGGATCGG TTGTTGTAAT TGCAGGTAGT ACAACATTGG TTGAAGGCGT TGATTATACA
GTAGATTATA ACTTAGGAAG AATTAAAATT TTAAATGACG GCGTACTGGC TTCCGGGCAG
GAAATACGGA TACGTTTTGA AAAGCAGGAT CTGTTTAATT TCAGAAGGAA ATCCTTTATG
GGAACACGGC TGGATTATAA AGTCAATGAA AATATTTTAA TAGGCGGTAC GTTCCTGCAT
TCTAATGAAG CACCTAACAT TACGCGTGTG AATATTGGAG ACGAACCCGC ATCCAATACA
ATCTGGGGCG TAGATGCAAA CATCAAGCAG GATTCCAGAA TGCTTACACG TGCAGTAGAT
TTATTACCTG TTGTAGCTAC TAAAGCTCCA TCAAATATTA ATTTTCAGGG AGAGTTTGCA
CAGTTCATAC CGGGCTACAA TAAAATCATT GATAAGAATG GCGGCGGCGA AGGCGGTATT
GCATTTATAG ATGATTTTGA AGGAGCTAAA ACACCGTACG ATTTAACACG TTCTCCCATG
ACGTGGCGTA TAGCATCAAC ACCACAGCGT ATAGACAGTG CGAGAAGCAA TACGCTGGCA
TACTCTTATA AAAGAGCGAA GCTTGCCTGG TACAACATTG ACAATATTTT CTACCGTTCT
AATAATGGGC TTCCCGGATA TCTCAGCTAT GAGAACATAA CCAATCACTT TGAACGAAAC
ATTACCATAC AGGAACTGTT TCCGAACCAG GATCTCAATG TTGCTGTTAC CAATATTCCA
ACGCTGGACC TGGCATACTA TCCGAGAGAA AGAGGTTCTT ATAACTACAA CCCGGTATTA
ACAACAGACG GGCGGTTGGT AGACTCTACC AAGAACTGGG CGGGTATGAC CAAGGATCTT
AAAAATGATG TAGATTTTGA TAATGCAAAC ATTCAGTACA TCGAGTTCTG GTTGCTGAGT
CCATACATGG AATCAAACGG CCGTAACCTT ATTGACGGGG TTCCGATGGA TGAGACAAAT
ACAGGTACGC TTTATTTCAA TTTAGGAAGT ATATCAGAAG ATGTGCTTAA AGATAACCTG
CAATCATTTG AAAACGGTTT GCCAACAAAT GATGCACTAA TAGCATCAAA TACAGATACA
ACACTGTGGG GGCTTGTGAG TAACCAGCAG TTTATTACAA ATGCGTTTGA TAACTCAAGC
GGTTCAAGAG AAAAACAGGA TATCGGTCTG GATGGGTTGA ATGATGCACA GGAAGTAAAT
TTTTTCAGCG GCTATTTGAA TGATGTTAAT AATTTATCGG CATTAACTCC GCAAGCGTAT
GCGAACTTAA CGAGTGATGT AAGTGCAGAT AACTTCGGCT ATTATTTAGG AGGCGACCTG
GATGCCAGTG AGGTGTCAAT ATTAGGCAGG TATAAAAATT ATAACCGTAC ACAAAACAAC
TCACCGGTAA ACAGCGGTGC TGCTATAACC CCTGCTAATA CTACCTATCC CGACAATGAA
GATTTAAATG CCGACAATAC GCTCAACACC CTTGAAGAGT ATTATGAGTA TAAAGTAAGT
ATTGCAAAAG ATAAATTTAA AGTAGGTGAA AATTATATTG TAAGCTCCAG AAATTACACG
GTTGAATACG TAGGAGGAGC AAAGGAAACC GTAACCTGGT ATCAGTTCAG AATTCCGATC
CGCACACCGG ACTCTATTGT AGGAGATATT CAGGGCTATA AATCCATTAA ATGGATGCGT
ACCTATGTTA CAGATTTCAA ATCTCCGGTA GTGCTTCGTA TGGCACAGTT TCAGCTGGCA
GCCAATCAAT GGAGAACGTA CCAGTTGGAA GATAAAGAAA CTGGCGCCGC TGTCGGAGGC
AAACCAGACT TGTCTGTATT AGATCTGTCT GTTGTAAATA TTGAAGAGAA TAGTGACCCA
ACCGACAATA CAACCCCCTA CGTTTTACCG CCGGGCTTTA ACAGGGATTA CGATGCTACT
TCAGTCACCA CACGAAGAAA CAATGAGCAA TCGCTCCGCT TGTGTATCGA TGATTTAGCA
GATGGGTATA CAAAGTCTGC GTATAAAAAT GTCAACGTAA ACCTGATGAA TTACAAACAG
CTTAACATGT TTGTGCATGC AGAAACCACG AAAGATATTG CAGCTTATAA CGGAAACGCA
TATGCGATTT TGAGATTAGG TACAGATTAT ACGAATAACT ATTACGAAAT TCAGGTGCCG
CTGCGCTTCA CGGATCCGAT TGGTACCAGA GACCCCAATG AGGTATGGAG AAGTGAAAAT
GAAATCAATG TTAATATAAG TGATCTGGTT GCAACAAAAG TTGCGCGTAA TAGTGCAGGC
GCTTCCATGC AGCAATCGTT TACACAAACG ATGGCAAATG GACAGATACT TTCAATCGTT
GGCAATCCGG ATTTGTCTGC TGTTGTAACC ATCATGATTG GGGTTAGGAA TCCGCGTGGC
GGCTACACGA GCCCAATGTC GTTTTGTATC TGGGCAGATG AACTGCGCAC TTCCGGCTTT
GTCAGCCACA GCTCGTATGC GTATGCTGCC AAGCTGAATA TGAAGCTGGC CGATCTGGGT
ATGTTTAATT CTTCTATCCG GTATACATCT GCCGGTTTTG GTTCGCTTGA TCAAAAAACA
TCTGAACGGG AACGTGCAAA CACACTTGAG TATGGATTGA ATACGTCTCT GAATATGGAA
AAATTTATTC CGGGCAAAAC AGGAATAAAA CTGCCTATGT ATGTAGGCTA TAACCGAAAG
ACTATTACAC CCGTATATGA TCCGCTCAAT CCGGATGTGG ATCTCCAGCA ATCGGTCAAT
GGACAGGCCG ATCCCAAGGC ATATAAAAAA TTAATTATTG ATGAAACAAC CAATAAGGCC
ATAAACTTTC AAAACATACA GAAGGTAAAA GTAAACCCGG CGGCTAAAAA ACATGTATAC
GATGTTGAAA ATTTAACACT GAGTTTGGGC TTCTCTGAAT TGAAGCGAAC CAGCTTTGAT
ATTAAAGAAT ACAGATCTAC TAACTATACA GGTTCATTAG GTTATTCCTA CACAAATAAC
TCTAAAAGTT ATACGCCTTT TAAATCAATG ACTGCCACAA AAGGTATTCT GACACCACTA
ATAAAGGATT TCAATTTTAC ACTGCTGCCA AGTCAATTTA CATTCAGAGG GGCGTTAGAT
CGAAAAATTA CCAAATCGCA GTATTACGAA TCCGGGCCGA CAACTCCTGC ACAAAAAGCA
TTGTATGAAA AATATTTCAC GTTCACGAGA AATTATACAA TGATGTGGAA CTTTACCAAA
TCAATAACCG GTACCTATAA CGCGAATGCA TACGCATTGA TTGATGAACC CAACAGGGAA
CCGGGTGATC AGGCATACAA AGATACAATT GCAGCAAATT TAATGAAGTT TGGGCGTTTG
AAAAGATACG ACCAAACCAT GGGCCTTCAA TATAAGCTGC CGTTAGATAA GATTAAGGCG
CTTAACTGGA CAACCATGGA TTATACCTAC AAAGCAGGCT ACAACTGGGA AGCGGGTTCA
CTTGCCCTAA GGGATTCACT TGGAGCAAAT GTAATGCAGA ATAAAAGTGA CAATCAGATC
AATGGCAAAA TTGATCTGGA CAAACTTTAC AGCAAGTCAA AGTTTTTAAC AGAAATGAAA
AAACCTAAAC CGGCGCCGAA AAAACCTGAC CCCAAAGATA CCATACCGCC ACCGCCAAAC
CGTGCATTGC TGAAGGCTGC TTTCCAGACA TTGATGGCAA TTAAAAATGC CAACATAACG
TATTCCAATC AACAGACCAC AAACATTGGC GGCTTCTTGC CAACACCGCA TTACTTTGGT
GTAGCTGATG TACCGCAGGG AGGAGAAATG CTTCCGTTTG TATTGGGTTC TCAGGATGCA
TCATTCAGAG AAACAGCCGC AAGTAACGGA TGGATTTCGA AATCAAGAAG TTTGAATAGT
TTATTCACGC AGCAGCAAAC ACAAAACATT ACCGTAAAAA TAAACGCAGA GATTACGAGA
GATCTGAAAA TAGCATTCGA ATCCAAATAC TCCTATTCGA GGCTGTATGC AGAACGGTAT
AGATATAATG ACACACTGCA AAGGTACATT TCTGAAAACC CATCGCTGAG TGGTAATTAT
TCAATTTCAA CAATTACAAT TTTAACATCC TTTGATAAAC ATGTGAGTGG TTCACTCGAC
CCGAACTCTT CAGCAAATTT TGAAAAATTC AAATCGTACC GTCAAATAAT GATTGACCGA
CTGGATGGAC AACCGGGCGA TTATGAACAA AATTCTCAGT CTGTTTTGAT TCCCGCTTTT
CTGGCCGCTT ACATGGGACA GGATCCGAAC AAAAGCGACC TGAATGGGTT CCCGAAAATT
CCATTACCCG GCTGGCAAAT TGATTATTCA GGATTGGCAA AAGCTAAAAT GTTTAAAAAG
AAGTTCCAGT CAATAACCTT TTCGCATAAA TATTCAAGCC AGTATTTAGT TGGAAGTTAT
ACTTCTCAGA ACGTTTATAA TTACAACTAC ATAAATCCCG GAAGTGATTT TTACAGTCCT
ACACGCATTC CGGATTCGAT AAATTCAAGC GGGCAGCTTG TTCCGATTTA TGTTATCAAC
GGTATTTCTG TGAATGAAGC ATTTGCACCA TTTATAGGGT TTAATGCCCG TACAAAAAAT
AAGATTACGT ATAAATTATC TTACAGCCGT ACCCGCACGT TAAATATGTC GCTTACCAAC
GCGCAGTTAA CAGAAAGTCT GAATAATTCG TGGCAGATAG GGATTGGATT TGCGCGTTCA
AATGTACCTA TTCCAGGATT TTTAACCGGG GGACAAAAAC TAAATCTGAA AAATGAATTA
AATATTCAGG TAAACTTTAC GCTCAATGAT ATGATAACTT ATCAACGTAA ATTCGAAGAA
AATACTACCG TTACGGCAGG TAATACCAAT ATACAATTCA AGCCAACCAT TAGCTATAAT
ATTTCGCAGC GGGTTACCAT GATGTTTTAT TTTGAACGGA CCATTAACAG TCCTAAAATT
TCATCTTCAT ACAGACGCGC TACAACAGCT ATTGGTATTC AACTCAGATT TACATTATCT
TAA
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| Protein sequence | MNSRKKFILP LFGVSLFFVF WAAFSSTRDG SYYSFKKIFT PDDSTKRIKT RRPTYQSEDR
VGDQYNNPTN KSPLELQNPD NITEEVEIDT ATGNYIVREK IGDMEYRTQT YLTFEEYYKY
KNKQLLRDYW QSKGKTDPND PMATPPQKPG QPFGFTKHIK GLEGPFGSNY VDIRPSGLVT
LDFAGRWQRV NNPALPIKQQ RNGLFDFDQQ ISMNVIGKIG EKLKLTVNWD TKAAFEFQNS
VKIQYTAFEE DIIQAIEVGR INMPLNSSLM TGPQNLFGLK TKLQFGRLSV TAVAARQDGK
LDEIKIGGGG QGRTFEIKGD AYEPYRHFFL GQFFRENYER SLKSSPTILS NVQIKRVEVY
VTNRNNTTAN LRNVVGYLDL GENDSLYRKN LTKNVPTDAP FNEINNLYPA INGFRSIETL
SADVATLNAA CGCTFQDGTD YTYLKSARKL APTEFTFHPD LGYITLQSRL TEDVALLVAY
QYTYDGKEYT VGELSDEYAN LPENQLVFAK MIKPPLVKTR LPTWDLMMKN IYQIGVTQIQ
RDNFQFRIIY KDDATGADIP NLQEGTNTKG VPLLQLSGMD LLNPNNDQAP DGNFDYVEGL
TIDSKNGRII FPVLEPFGSN LEKYFLPTEQ ALKSKYVFSE LYDSTFSDAQ QIASKDKYFF
KGRYTAGTAS EIILPGINVS QGSVVVIAGS TTLVEGVDYT VDYNLGRIKI LNDGVLASGQ
EIRIRFEKQD LFNFRRKSFM GTRLDYKVNE NILIGGTFLH SNEAPNITRV NIGDEPASNT
IWGVDANIKQ DSRMLTRAVD LLPVVATKAP SNINFQGEFA QFIPGYNKII DKNGGGEGGI
AFIDDFEGAK TPYDLTRSPM TWRIASTPQR IDSARSNTLA YSYKRAKLAW YNIDNIFYRS
NNGLPGYLSY ENITNHFERN ITIQELFPNQ DLNVAVTNIP TLDLAYYPRE RGSYNYNPVL
TTDGRLVDST KNWAGMTKDL KNDVDFDNAN IQYIEFWLLS PYMESNGRNL IDGVPMDETN
TGTLYFNLGS ISEDVLKDNL QSFENGLPTN DALIASNTDT TLWGLVSNQQ FITNAFDNSS
GSREKQDIGL DGLNDAQEVN FFSGYLNDVN NLSALTPQAY ANLTSDVSAD NFGYYLGGDL
DASEVSILGR YKNYNRTQNN SPVNSGAAIT PANTTYPDNE DLNADNTLNT LEEYYEYKVS
IAKDKFKVGE NYIVSSRNYT VEYVGGAKET VTWYQFRIPI RTPDSIVGDI QGYKSIKWMR
TYVTDFKSPV VLRMAQFQLA ANQWRTYQLE DKETGAAVGG KPDLSVLDLS VVNIEENSDP
TDNTTPYVLP PGFNRDYDAT SVTTRRNNEQ SLRLCIDDLA DGYTKSAYKN VNVNLMNYKQ
LNMFVHAETT KDIAAYNGNA YAILRLGTDY TNNYYEIQVP LRFTDPIGTR DPNEVWRSEN
EINVNISDLV ATKVARNSAG ASMQQSFTQT MANGQILSIV GNPDLSAVVT IMIGVRNPRG
GYTSPMSFCI WADELRTSGF VSHSSYAYAA KLNMKLADLG MFNSSIRYTS AGFGSLDQKT
SERERANTLE YGLNTSLNME KFIPGKTGIK LPMYVGYNRK TITPVYDPLN PDVDLQQSVN
GQADPKAYKK LIIDETTNKA INFQNIQKVK VNPAAKKHVY DVENLTLSLG FSELKRTSFD
IKEYRSTNYT GSLGYSYTNN SKSYTPFKSM TATKGILTPL IKDFNFTLLP SQFTFRGALD
RKITKSQYYE SGPTTPAQKA LYEKYFTFTR NYTMMWNFTK SITGTYNANA YALIDEPNRE
PGDQAYKDTI AANLMKFGRL KRYDQTMGLQ YKLPLDKIKA LNWTTMDYTY KAGYNWEAGS
LALRDSLGAN VMQNKSDNQI NGKIDLDKLY SKSKFLTEMK KPKPAPKKPD PKDTIPPPPN
RALLKAAFQT LMAIKNANIT YSNQQTTNIG GFLPTPHYFG VADVPQGGEM LPFVLGSQDA
SFRETAASNG WISKSRSLNS LFTQQQTQNI TVKINAEITR DLKIAFESKY SYSRLYAERY
RYNDTLQRYI SENPSLSGNY SISTITILTS FDKHVSGSLD PNSSANFEKF KSYRQIMIDR
LDGQPGDYEQ NSQSVLIPAF LAAYMGQDPN KSDLNGFPKI PLPGWQIDYS GLAKAKMFKK
KFQSITFSHK YSSQYLVGSY TSQNVYNYNY INPGSDFYSP TRIPDSINSS GQLVPIYVIN
GISVNEAFAP FIGFNARTKN KITYKLSYSR TRTLNMSLTN AQLTESLNNS WQIGIGFARS
NVPIPGFLTG GQKLNLKNEL NIQVNFTLND MITYQRKFEE NTTVTAGNTN IQFKPTISYN
ISQRVTMMFY FERTINSPKI SSSYRRATTA IGIQLRFTLS
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