Gene CHU_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0022 
Symbol 
ID4183671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp24307 
End bp25101 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content34% 
IMG OID638070020 
Producthypothetical protein 
Protein accessionYP_676656 
Protein GI110636449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0596041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAAAA AATTGCCGAC GGCAAGTTGT ATGAATAAAA TAATTGCACT GGTTTTAATA 
AGTTCTTTCT CATTTATTTC TTGTAAAAAA ACAGCTGTTG TAAGTCAGCA ACCGGCAACT
GAGGTTAAAA AGGCAGTTGT TGATTTCCAT CCGGTAAGCA CGGACTTTAT ATACCTTTCA
ACAAAAACAA AACTTGAATA TGTTGACGGA AACAGCAGCG ATCAATTTGC GTTGTCTTTG
CGCGTAAGAA AAGATAGTGT TATATGGCTA TCTATTGGCA AAGCAGGTGT TGAAGGTGTT
CGTGGGTTAT TAAGACCGGA TTCGGTTTTT GTTTTAGATA AATTAAAAAA TGATTCGTAT
AGTTACGATG TTACCTATTT GCAGAATCTG ATTCAGTCAA ACTTATCATA CAGCAATATT
CAGAATTTGG TGTTAGGTGA TTTGGTTTTT CCATATGAAC CTGCAGATGA AGTAAATAAA
AATGAAACAC ATTTTGTTCT GAATCAGAAA AAAGAAAATC TGCTTATCGA GAGTGTTATT
CGGATAGATA ATATGAAAGT AGAAAGGACA ACGATTGTTG ATTCGGTTGC GCATTCTAAA
ACAGTCGTTG CATACAGTAA TTTCGTGTAT GCCGACTCAA TACTGGTTCC CGCTGTATGC
TCTATGGATA TTTCTTTTGC CAGTAATAAT AAACCCATTG AAAGGAAGAT TGTGTTAACA
CATTCTAAAA TTGAATTTCC AACCAAGCCA TTAAATTTTC CATTTAATGT TCCAAAAAAA
TTCAATGAAA AATAA
 
Protein sequence
MIKKLPTASC MNKIIALVLI SSFSFISCKK TAVVSQQPAT EVKKAVVDFH PVSTDFIYLS 
TKTKLEYVDG NSSDQFALSL RVRKDSVIWL SIGKAGVEGV RGLLRPDSVF VLDKLKNDSY
SYDVTYLQNL IQSNLSYSNI QNLVLGDLVF PYEPADEVNK NETHFVLNQK KENLLIESVI
RIDNMKVERT TIVDSVAHSK TVVAYSNFVY ADSILVPAVC SMDISFASNN KPIERKIVLT
HSKIEFPTKP LNFPFNVPKK FNEK