Gene CHU_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0014 
SymbolmutL 
ID4186895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp15168 
End bp17000 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content41% 
IMG OID638070012 
ProductDNA mismatch repair protein 
Protein accessionYP_676648 
Protein GI110636441 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA TCATACGTTT ATTACCCGAT AATATTGCGA ACCAGATTGC AGCAGGGGAA 
GTTGTTCAGC GGCCGGCCTC CGTTGTAAAG GAATTGCTGG AAAACTCTGT GGATGCAGGA
AGTACAAATA TACAGCTGAT TGTAAAAGAT GCTGGGAAGC AATTGATTCA GGTGATTGAT
AATGGGAAAG GTATGAGCGA TGGAGATGCG CGCCTGTGTT TTGAGCGTCA TGCAACATCT
AAGATCCGCA GTGCAGACGA CCTGTTTGCA ATCCGCACCT TTGGTTTCAG AGGTGAAGCG
ATGGCTTCCA TTGCTTCGGT TGCCCAGGTA GAAATGAAAA CAAAACTGCC GGGAAATGAA
TTGGGTACGC TAATCCGTAT TGAAGGATCT GCTATACTTG TTCATGAACA GACGGCACAT
CCGCAGGGTA CTTCAATTTC AGTAAAAAAT CTTTTTTATA ACGTTCCGGC GCGCCGGAAC
TTCTTAAAAT CAAATTCTGT GGAAATGCGC CACATTATGG ATGAATTTGT GCGTGTTGCC
TTAGCACATC CGGAAGTAGC ATTTTCATTT TACCACAACG ATTTGGAATT ATTTAACGTA
CCTGAAGAGA CACTCAGCAA AAGAGCGGTT TCTTTATTGG GCGGAAGTTA TAGAGAACAA
TTAATTCCGT GTAAAGAAGA AACAGATTTC GTTTCTATAT CCGGCTATAT CGGCAAACCG
GAGAGTGCGC GTAAAACACG GGGAGATCAG TATTTCTTTG TCAATAACCG GTATATACGG
AGCAATTATC TGCATCACGC AGTTATGCAT GCATTTGAAG AGCTTATTCC TACAGATGCA
TTTCCGTTTT ATCTTTTATT TATTGAAATA GATCCGGCAC ATATTGACGT AAATGTGCAT
CCGACAAAAA CGGAGATCAA ATTCGATGAT GAAAAAACAG TTTATGCAAT CATTAAAGCC
TGCGTAAAAC GTTCGCTGGG TACGCATAAT ATTATGCCAT CATTGGATTT CGATTTCAAT
GTAAACGTTT CAGGATTCAC AGGGATGGGG CTTTCAGACA GTTCGGGACG CGAATCGAAC
ACAAATTTCA CACCAAAATC ATTTTCAACA TCAGATAGTA TTCAACGGTC AAATCAATCA
AACTGGGAAC GCATGTATAG TGGGTTAGAG AATAATAGAG AAGAAGTATA TCAGGAATCG
ATTAAAATGG TCAGTGCTAT TAACGGAACG GAAGATTTAA AACAGTTAAG TAAAGAACAG
CTGTACACAG AGAATACCTC AACATTTCAG CTGCATCAGA AATATATTGT AACACAGGTT
AAGTCCGGCG TGTTATTGGT AGATCAGCAG GCAGCACACG AACGTATTTT ATTTGAAAAA
TACATCGGCA TGCTGCAGAA CCGTTTCGGA AGTTCACAGC AGTTCCTGTT TCCGCAGACA
CTTGAATTAA GCGCGGCAGA TTTTGCAATG GTTGTTGAAA TGGAAGAAGA TATCCGCAAG
CTTGGATTTG TATTTAACGT ATTCAGCAAT ACAACGATCG TAGTAAACGG CGTGCCTTCG
GATGTTAAAA GCGGCAATGA AAAAAATCTG TTTGAAGGCC TGATTGAACA GTTCAAACAA
AACAGAACAG ATTTGAAAAT TGACCGTCAG GAAAACCTGG CACGTTCATT GGCCAAGCGT
TCTGCTATCC GTGCGGGTAA TAAATTATCA TTAATGGAAA TGAACTCCAT TATAGATCAG
CTTTTTGCAT GCAAGTCCCC GAATTATGCG CCGGACGGCA ATCTTACCGT TGTAATGCTG
GATATGGATA AGATCGGCAG ATTATTTATG TAA
 
Protein sequence
MSDIIRLLPD NIANQIAAGE VVQRPASVVK ELLENSVDAG STNIQLIVKD AGKQLIQVID 
NGKGMSDGDA RLCFERHATS KIRSADDLFA IRTFGFRGEA MASIASVAQV EMKTKLPGNE
LGTLIRIEGS AILVHEQTAH PQGTSISVKN LFYNVPARRN FLKSNSVEMR HIMDEFVRVA
LAHPEVAFSF YHNDLELFNV PEETLSKRAV SLLGGSYREQ LIPCKEETDF VSISGYIGKP
ESARKTRGDQ YFFVNNRYIR SNYLHHAVMH AFEELIPTDA FPFYLLFIEI DPAHIDVNVH
PTKTEIKFDD EKTVYAIIKA CVKRSLGTHN IMPSLDFDFN VNVSGFTGMG LSDSSGRESN
TNFTPKSFST SDSIQRSNQS NWERMYSGLE NNREEVYQES IKMVSAINGT EDLKQLSKEQ
LYTENTSTFQ LHQKYIVTQV KSGVLLVDQQ AAHERILFEK YIGMLQNRFG SSQQFLFPQT
LELSAADFAM VVEMEEDIRK LGFVFNVFSN TTIVVNGVPS DVKSGNEKNL FEGLIEQFKQ
NRTDLKIDRQ ENLARSLAKR SAIRAGNKLS LMEMNSIIDQ LFACKSPNYA PDGNLTVVML
DMDKIGRLFM