| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0007 |
|---|
| Symbol | |
|---|
| ID | 4186888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 5690 |
|---|
| End bp | 6469 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638070005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_676641 |
|---|
| Protein GI | 110636434 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.8892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTACTAT TGCTTCGCTT TTAGCGTTCA CATTAGCGGC AAATGCACAA
CAGGAAACAA CTGTTACTAC AACAACAACT GTTCCTGTAA CAAGAGCTTA CAAGCCGGGT
GCTGGTGATG TACTTGCTGA AATCGGCTTT CTTGCTGGCG GTATTGGTGC TAACCCAACA
AGTTTGCAAA ACAGCGCATT TGGTGGTGTT AGTCCACAAT TAAAATTCCG TTATTTCTTA
CAGGATCAAG TTGCATTGCG TATTGGATTT GGCTTTACAC AAACTGCTGA AAAAAACAGA
TACTATGAAG CTAATCCAGG TTCTGGAGAA GGTTTTGCAA GAGATGCTTA TTCTCGATTT
GATTTAAACG CTGGTCTTGA AAAACACTTT ACAGGTACAG GCCGTCTTTC TACATACGTA
GGTGCTGATC TTTTATTCCA GAAAGTCGGT GCTTCTACTA AATGGGAAAA TTCAGATGGT
AACACATTTG TTGATGGTCA AAAAAGACAG ACAAAAGGTT TCAATACTGC AGGTGATAAC
GCTTCTTTCG GTTTCGGATT ACGTGCCGTT TCAGGTGCTG ACTACTACTT TGTAGAAAAA
GTATACCTTG GTGCTGAATT CGGATGGGGC TTTGTAGCTT CTAAAGAAGG CAAAACAAAA
GATGAAACTA CTCCTGCTGG CGGTGGTGCA ACAAATACTG TTGAAACTAA ATCTACAGGT
GGTACATTCA ACTTAGCGCC AAGCTTAACA GCTGGTCTTC GTTTAGGTTT CATTTTCTAG
|
|---|
| Protein sequence | MKKIITIASL LAFTLAANAQ QETTVTTTTT VPVTRAYKPG AGDVLAEIGF LAGGIGANPT
SLQNSAFGGV SPQLKFRYFL QDQVALRIGF GFTQTAEKNR YYEANPGSGE GFARDAYSRF
DLNAGLEKHF TGTGRLSTYV GADLLFQKVG ASTKWENSDG NTFVDGQKRQ TKGFNTAGDN
ASFGFGLRAV SGADYYFVEK VYLGAEFGWG FVASKEGKTK DETTPAGGGA TNTVETKSTG
GTFNLAPSLT AGLRLGFIF
|
|---|
| |