| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0005 |
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| Symbol | dedA |
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| ID | 4186886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4137 |
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| End bp | 4793 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070003 |
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| Product | integral membrane protein; DedA family protein |
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| Protein accession | YP_676639 |
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| Protein GI | 110636432 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.695694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAAT TCTTAAAACT TGCTGCCGAC TGGTTTCTGC ATTTGGATGC ACATTTAGGC
GAATTGGTTT CTAACTACGG TACCTTAGTA TATCTGATCC TCTTTCTTGT AATTTTTACA
GAAACAGGTT TGGTTGTAAT GCCGTTTCTT CCGGGTGATT CGTTACTGTT TGCTGCAGGC
ATGCTGGCAT CTTTAGGCGA CCTGAATCCA TGGCTGCTAA TTATATTACT GATCATTGCA
GCGATTCTGG GAGATACGGT AAATTACCAC ATTGGCAAAT ATATCGGGCC GAAAGTATTT
ACCGATGCAG TGCCTACAAA CTTTTTCATG CGTTTATTGA AAAAGGAACA CCTTGAAAAG
GCTCAGGCGT TTTACGAAAA ACATGGCGGC AAAACCATTA TCATGGCACG CTTTGTTCCC
ATTGTTCGTA CGTTTGCACC CTTCGTTGCC GGGGTGAGCA AGATGAATTA TTCCCGCTTT
ATTACATACA ATATTGTAGG AGGCGTCATC TGGGTTACCG GATTAACATT AGCCGGATAT
TATTTAGCAG AATTTGAATT CGTCAGAAAA AACTTTGAAA AAGTGATTTT TGCAATCATT
CTTATTTCTG TACTGCCAAT CGTAGTAGAA TTCTTCCGGA ACAAAAAAGC AGCATAA
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| Protein sequence | MIEFLKLAAD WFLHLDAHLG ELVSNYGTLV YLILFLVIFT ETGLVVMPFL PGDSLLFAAG
MLASLGDLNP WLLIILLIIA AILGDTVNYH IGKYIGPKVF TDAVPTNFFM RLLKKEHLEK
AQAFYEKHGG KTIIMARFVP IVRTFAPFVA GVSKMNYSRF ITYNIVGGVI WVTGLTLAGY
YLAEFEFVRK NFEKVIFAII LISVLPIVVE FFRNKKAA
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