Gene Meso_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4087 
Symbol 
ID4182787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4398558 
End bp4399430 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content58% 
IMG OID638069983 
Productprephenate dehydratase 
Protein accessionYP_676619 
Protein GI110636411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.885152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTG CGCGAAAAAC GAACAAGATC TCCTTCCAGG GAGAGCCGGG GGCCAATTCC 
GATACCGCCA GCCGCGACAT GTTTCCGCAC ATGGAGCCGC TGCCCTGCCC GACATTCGAA
GATGCTTTCA ACGCAGTAGA GACGGGCAAG GCCGATCTCG CCATGATCCC GATCGAGAAC
ACGATCGCAG GGCGCGTCGC CGATATCCAT CACCTTCTGC CTGAATCCCG GCTTCATATT
GTGGGCGAGT ATTTTCTGCC CATTCATTTC CAGCTGATGG TGCTTCCGGG CACCGATATA
TCGCAGATCA AGGCCGTCTA CAGCCATATC CATGCGCTTG GGCAGTGCCG GAAGATCATT
CGCAAGCACC GGTGGAAGCC CATGGTGGCC GGCGACACGG CGGGCGCGGC GCGAGTGGTG
GCCGAAGAAA AGGTGGTTTC GAACGCGGCG CTTGCGCCAC GGCTGGCTGC GGATCTTTAC
GGCCTGCAGA TCGTGGCGGA AAACGTCGAG GACACGGACA ACAACGTCAC CCGCTTCGTC
GTGCTTTCGA AAGAAAAGGC ATGGGCGCAG CGCAAGTCTC CAGACCAGCG CATGGTGACC
ACGTTCATTT TCCGGGTGCG CAACGTTCCG GCTGCGCTTT ACAAGGCGCT CGGCGGCTTT
GCCACAAACG GCGTCAACAT GACGAAGCTG GAGAGCTATC AGCTCGGCGG CAAGTTTTTT
TCCAGCCTTT TCTACGCGGA TGTGGAGGGA CATCCTGAAG ACCGAAGCCT TGCATTAGCA
TTGGAGGAGC TTCGCTTCTT CTCCCACGAA GTGCGGGTGC TCGGTGTTTA TGAAGGCCAT
CCATTCCGGG ATACGCAAAG CGAGGACGAT TGA
 
Protein sequence
MMIARKTNKI SFQGEPGANS DTASRDMFPH MEPLPCPTFE DAFNAVETGK ADLAMIPIEN 
TIAGRVADIH HLLPESRLHI VGEYFLPIHF QLMVLPGTDI SQIKAVYSHI HALGQCRKII
RKHRWKPMVA GDTAGAARVV AEEKVVSNAA LAPRLAADLY GLQIVAENVE DTDNNVTRFV
VLSKEKAWAQ RKSPDQRMVT TFIFRVRNVP AALYKALGGF ATNGVNMTKL ESYQLGGKFF
SSLFYADVEG HPEDRSLALA LEELRFFSHE VRVLGVYEGH PFRDTQSEDD