| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4067 |
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| Symbol | |
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| ID | 4181640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4376316 |
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| End bp | 4377272 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638069963 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_676599 |
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| Protein GI | 110636391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.548232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGCT TGAACAGGAA ACATGTGGCC GCCGCAGCTG TGGCGCTCGG GCTCGGATTC
CATCCGGCTG CCGCCGGCGC GCAGGAATTC GTCAATGTGC TCACGGGCGG CACGTCCGGC
GTCTATTATC CGCTCGGCGT CGCGCTCTCC AAGATCTACG GCGAAAATAT CGAGGGTGTT
CGCACGCAGG TGCAGGCGAC CAAGGCTTCG GTGGAGAACC TCAACCTTCT GCAGCAGGGC
AGGGGCGAGA TTGCCTTTTC GCTCGGCGAT TCCGTCAAGG CCGCCTGGGA GGGGCAAGAG
GAAGCCGGCT TCCCGCAAAA GCTCGACAAG CTCAGGGCCA TCGCGGCAAT CTATCCGAAC
TACATCCAGA TCGTGGCATC CGAGGAGTCG GGCATCGAGA ACCTAGAGGG CCTGAAGGGC
AAGAGCCTGT CAGTCGGCGC GCCCAAATCC GGTACGGAGC TCAATGCGCG CCAGATCTTC
GAGGCTGTAG GCATGAGCTA TAACGATCTG TCGAAGACGG AATATCTGCC CTTCGGCGAA
TCCGTCGAAC TTATGAAAAA TCGGCAGCTC GACGCCACCC TCCAGTCGGC GGGCCTCGGC
GTGGCCTCGA TCAAGGATCT GGCGGTTTCC ATGCCGATCA ACATGGTGGC CGTTCCCGCT
GAAGTCGCCG AGAAACTCGG CGCGCCTTTC CAGTCGGCGA CGATTCCGGC CGGTACGTAT
GAGGGCCAGA CGGAGGACGT CCCGACGCTT GCCGTCACCA ATATCCTCGT CACGCATTCG
GATGTCTCAG ACGAGGTGGC CTACCAGATG GCCAAGCAGC TTTTCGAGAA TCTGGATGAG
ATGACGGCCG CCCACGCCGC CGCCAGGGAC ATCTCGCTCG AAAACGCTGC CAAGGCCCTT
CCGATTCCGC TGCACCCCGG CGCGGAACGG TATTATAAGG AAAAGGGTCT GCTCTAG
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| Protein sequence | MIGLNRKHVA AAAVALGLGF HPAAAGAQEF VNVLTGGTSG VYYPLGVALS KIYGENIEGV
RTQVQATKAS VENLNLLQQG RGEIAFSLGD SVKAAWEGQE EAGFPQKLDK LRAIAAIYPN
YIQIVASEES GIENLEGLKG KSLSVGAPKS GTELNARQIF EAVGMSYNDL SKTEYLPFGE
SVELMKNRQL DATLQSAGLG VASIKDLAVS MPINMVAVPA EVAEKLGAPF QSATIPAGTY
EGQTEDVPTL AVTNILVTHS DVSDEVAYQM AKQLFENLDE MTAAHAAARD ISLENAAKAL
PIPLHPGAER YYKEKGLL
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