| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4034 |
|---|
| Symbol | |
|---|
| ID | 4182832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 4342589 |
|---|
| End bp | 4344175 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638069930 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_676566 |
|---|
| Protein GI | 110636358 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.419875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCG TCGCCAAATT CGCCAGTGTC GGCAGCGCGA CTATGGCAAG CCGCATCCTG
GGCTTCGCGC GCGAGGCGCT GATCGCGGCG GCGCTTGGCG CGGGACCGGT TACCGACGCG
TTCTATGCGG CCTTTCGTTT TCCCAACCTG TTCCGCAGGC TCTTTGCCGA GGGCGCATTC
AACACCGCCT TTATCCCGCT CTTTGCCAAG GAACTAGAAG GCGGAGGCAT GGAGGCGGCG
CGCCGTTTCG GCGAGGATGT GCTGGCGGTC CTGCTCACGG TTCTGATTGG TCTTTCCGCA
CTCGCCATGA TTTTCATGCC TCTGCTGGTA GGCACGATTG TTGCGCCGGG CTTCGCCGAC
ACGCCGGAAA AGTTCGACCT GACGGTCGCG ATGACCCGCA TCATGTTTCC ATACCTGACC
TGCATGTCGC TGGCCGCGAT GCTCTCGGGC ATCATGAACT CGATGCGGAA GTTCTTCCTG
GCGGCTCTCG TTCCGGTACT CCTCAACGTC ATTCTCATCG CAGTGCTGCT TGCAGGCCTG
TTTGGCTCCT TCTCCGAGCG CGGATCGGGC CTGATGCTTG CCTGGGGCGT CTTCATTTCG
GGCATCGCCC AGCTTGCGAT CCTGATTGTG GCGGTCCGCC GCACCGGCTT GTCCATGCGT
TTGCGCGCGC CAAAGCTTAC TCCCGCCGTG CGCCGCCTCC TGGTGTTGAT GGGGCCGGCG
CTCATCACCG GCGGCATCAT GCAGATAAAC CTGCTTGTGG GGCAGATCAT CGCGTCTACC
GAGGACAAGG CGATATCGCT CTTGAACTTC GCCGACCGCA TTAACCAGCT CCCCCTCGGC
GTCATCGGCG TGGCGGTGGG CGTGGTGCTC CTGCCCGAGC TTTCGCGCTC CTTGAAAGCG
GGCGATTTTG CCGATGCACA GCACCTGCAG AACCGCTCGC TGGAATTCGC ACTTGGCCTC
ACGCTTCCAG CCGCCATCGG TCTCATGGTG ATGCCGGCCC CGATCGTAAG CCTGCTCTAT
GAACGCGGTG AGTTCACTGC GCTCGACACG CAGATGACGG CGGCGGCGCT TGCCGCCTTC
GCCTCAGGCT TGCCGGCCTA TGTGCTGATC AAGGTGTTCC AGCCCGGCTT TTTCGCCCGC
GAGGACATGA AAACGCCCAT GTGGTTCTCG CTCGCTTCGG TGATCGCCAA TATCGGCCTG
AGCCTGGCGC TCTTCCCGCT CTATGGCCAT GTGGCGATCG CGCTCGCCAC CTCGCTTTCC
TCGTGGTTGA ATGTCGTTCT GCTGGCGGGC ACGCTTTGGC GGCGGAATGA TTTTCGCCCT
TCGCCGGTCA CCTGGCGCCG GGTAGCCATG GTTATATTCG CAAGCGCCGC CATGGGCGCG
GTCGCCTATC TGCTCAATGC CGTTCTTTCC GGGCCGCTGG AGCAAGCATC CGTGCTGCTG
CAGGGTCTCG GAGTGCTCTT CATCGTCGCT ATCGCGGGCG TGATTTACCT CGCCCTTGCC
ATTCTCACAG GCGCGATTGA CCGGGCAGAG CTTAAATCGG CTCTTCGCAG ACGCCCGCGG
CCGAATCCGG CCACGCAGCA AGGTTGA
|
|---|
| Protein sequence | MSLVAKFASV GSATMASRIL GFAREALIAA ALGAGPVTDA FYAAFRFPNL FRRLFAEGAF
NTAFIPLFAK ELEGGGMEAA RRFGEDVLAV LLTVLIGLSA LAMIFMPLLV GTIVAPGFAD
TPEKFDLTVA MTRIMFPYLT CMSLAAMLSG IMNSMRKFFL AALVPVLLNV ILIAVLLAGL
FGSFSERGSG LMLAWGVFIS GIAQLAILIV AVRRTGLSMR LRAPKLTPAV RRLLVLMGPA
LITGGIMQIN LLVGQIIAST EDKAISLLNF ADRINQLPLG VIGVAVGVVL LPELSRSLKA
GDFADAQHLQ NRSLEFALGL TLPAAIGLMV MPAPIVSLLY ERGEFTALDT QMTAAALAAF
ASGLPAYVLI KVFQPGFFAR EDMKTPMWFS LASVIANIGL SLALFPLYGH VAIALATSLS
SWLNVVLLAG TLWRRNDFRP SPVTWRRVAM VIFASAAMGA VAYLLNAVLS GPLEQASVLL
QGLGVLFIVA IAGVIYLALA ILTGAIDRAE LKSALRRRPR PNPATQQG
|
|---|
| |