Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3928 |
Symbol | nusA |
ID | 4180409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4229194 |
End bp | 4230798 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069822 |
Product | transcription elongation factor NusA |
Protein accession | YP_676460 |
Protein GI | 110636252 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTCA GTGCAAACAG GCTGGAGCTC TTGCAGATCG CTGATGCGGT GGCTCGCGAG AAATCGATCG ACAAGACGAT CGTAATTCAG GCGATGGCGG ATGCTATCCA GAAGGCCGCT CGCTCGCGCT ATGGCCAGGA AACCAACATC CGCGCGGACA TCAACGCTCA AACGGGCGAG ATGAAGCTGC AAAGGCTGAT GGAAGTTGTC GAGAATGTGG AAGAACCCGC ACGGCAGATT TCCATTGTAG ACGCGCGCAC GCGCAATCCG GATGCGCAGG CTGGCGATTT TATCGCGGAG CAGCTTCCGC CGATGGATTT CGGCCGTATC GCTGCGCAGT CGGCCAAACA GGTGATCGTT CAGAAAGTGC GCGAGGCCGA GCGCGACCGG CAGTATGAGG AATATAAGGA TCGCGTAGGC GAGATCGTCA ACGGCACGGT CAAGCGCGTG GAATATGGGA ACGTGATTGT GGATCTTGGC CGCGGCGAGG GCATTATCCG CCGTGACGAA TTGATCCCGC GCGAGTCTTT CAAATATGGC GATCGCGTTC GTGCCTATGT CTATGACGTG CGTCGCGAGC AGCGGGGCCC GCAGATCTTT CTTTCCCGCA CCCATCCGCA ATTCATGGCG AAGCTCTTCA CCATGGAGGT GCCGGAGATT TATGACGGGA TCATCGAGAT CAAATCGGTG GCCCGCGATC CGGGCAGCCG CGCCAAGATT GCGGTGATCA GCCACGATTC CTCGATCGAC CCGGTCGGCG CCTGCGTGGG TATGCGCGGG TCCAGGGTTC AGGCCGTGGT GGCCGAGCTC CAGGGGGAGA AGATCGACAT CATTCCCTGG AACGAGAACG CGGCGAGCTT CATCGTCAAT GCGCTTCAGC CGGCGGAAGT CTCGAAAGTC GTGCTCGACG AAGACGCCGA GCGCATCGAG GTGGTTGTTC CCGACGACCA GCTTTCCCTT GCCATTGGAC GTCGCGGCCA GAACGTGCGG CTTGCCTCCC AGCTCACCGG CTGGGACATC GACATCCTGA CGGAGGAAGA GGAGTCTCAG CGCCGGCAGA AAGAGTTCAC CGAACGCTCG AACCTCTTTA TGGACGCTCT CAACGTCGAT GAAATGGTCG GCCAGGTGCT GGCGTCCGAA GGGTTCACCA GCGTCGAGGA AATCGCCTAT GTGGACGCGG ACGAAATCTC TTCTATCGAC GGCTTCGACG AGGATACGGC CGAGGAGATT CAGGCGCGTG CCCGGGAATA TCTCGAGCGC ATCGAGGCTG AACGGGATGC CAAGCGCAGA GAACTCGGTG TCTCCGACGA TCTGCGCGAA ATTCCTGGCA TGACCACTGC AATGATGGTC AAGCTCGGCG AGGACGGCGT AAAAACCATA GAGGATTTCG CGGGCTATGC GGTTGACGAC CTCGTAGGCT GGAGGGAGCG CAAGGACGGT GAGAACAAGT TCTTCCCGGG CGTCTTTTCA GATCTCGACC TCAGCCGCGC CGAGGCGGAA CAGATGGTGG TCGCAGCTCG TCTGAAGATG GGCTGGATCA GCGAAGATGA CCTGCAGTCG GAAGCCGAGG AAGAAACCGA GGAAACCCAG CCGATGGAAG GCTGA
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Protein sequence | MAVSANRLEL LQIADAVARE KSIDKTIVIQ AMADAIQKAA RSRYGQETNI RADINAQTGE MKLQRLMEVV ENVEEPARQI SIVDARTRNP DAQAGDFIAE QLPPMDFGRI AAQSAKQVIV QKVREAERDR QYEEYKDRVG EIVNGTVKRV EYGNVIVDLG RGEGIIRRDE LIPRESFKYG DRVRAYVYDV RREQRGPQIF LSRTHPQFMA KLFTMEVPEI YDGIIEIKSV ARDPGSRAKI AVISHDSSID PVGACVGMRG SRVQAVVAEL QGEKIDIIPW NENAASFIVN ALQPAEVSKV VLDEDAERIE VVVPDDQLSL AIGRRGQNVR LASQLTGWDI DILTEEEESQ RRQKEFTERS NLFMDALNVD EMVGQVLASE GFTSVEEIAY VDADEISSID GFDEDTAEEI QARAREYLER IEAERDAKRR ELGVSDDLRE IPGMTTAMMV KLGEDGVKTI EDFAGYAVDD LVGWRERKDG ENKFFPGVFS DLDLSRAEAE QMVVAARLKM GWISEDDLQS EAEEETEETQ PMEG
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