| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3851 |
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| Symbol | |
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| ID | 4182442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4153433 |
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| End bp | 4154416 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638069743 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_676383 |
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| Protein GI | 110636175 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.296178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGACT TCAGCCGGCA ATCGGAAGCG ACGACACGCG GGGCGCGGAT GCTGCGCACG
GCGATGGGTC CGGCTATTGC CGGCTTCCTC GAAGACACCC GCGTCGTCGA AGTGATGCTC
AATCCGGACG GACGCCTGTG GGTCGACCGC CTGGCCGAGG GCCTCGCCGA TACCGGAGAA
CGGCTCTCGC CCGCTGACGG CGAGCGCATC ATCCGGCTGG TCGCGCATCA CGTCGGTGTC
GAGGTGCATC CGCGCTCGCC GCGCGTGTCG GCTGAGCTGC CCGAGACCGG CGAGCGGTTC
GAGGGCCTTT TGCCTCCCGT GGTCTCGTCG CCGGCTTTCG CCATCAGAAA GCCGGCGGTC
GCGATCTTCA CGCTCGACGA CTATGTGGCC GCCGGGATCA TGGAAAGCGG TCAAGCCGAG
GTGCTGCGCA TGGCGGTCGC CGCGCGCAAG AACATCCTCG TCGCCGGCGG CACCTCGACC
GGAAAAACCA CGCTCACCAA TGCGCTGCTG GCCGAGATGG CCAAGACCGA GGATCGCGTC
GTCATCATCG AGGACACGCG CGAGCTTCAG TGCAGCGCTC CCAACCTCGT CGCCATGCGA
ACCAAGGACG GCGTGGCGAC ACTCTCGGAT CTGGTGCGCT CGTCGCTCCG CTTTCGTCCG
GACCGCATCC CGATCGGGGA AGTGCGCGGG AGCGAAGCGC TGGACCTTCT GAAAGCGTGG
GGGACCGGGC ATCCCGGCGG GGCCGGCACT ATTCACGCCG GCAGCGCCAT CGGTGCGCTG
CGTCGTCTCG AGCAGCTCAT CCAGGAAGCC GTCGTCACCG TCCCCCGCGC TCTGATCGCC
GAGACGGTCG ACCTGATCGC CGTGCTCTCC GGCAGGGGCG CCGCGCGCCG TCTCTCCGAG
CTTTCCGCCG TCGAGGGCCT TGGCCCGGAT GGCGACTACC GCCTCAAGCC CGCAACACCC
AGCCACGACG GAGACGAAAT ATGA
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| Protein sequence | MADFSRQSEA TTRGARMLRT AMGPAIAGFL EDTRVVEVML NPDGRLWVDR LAEGLADTGE
RLSPADGERI IRLVAHHVGV EVHPRSPRVS AELPETGERF EGLLPPVVSS PAFAIRKPAV
AIFTLDDYVA AGIMESGQAE VLRMAVAARK NILVAGGTST GKTTLTNALL AEMAKTEDRV
VIIEDTRELQ CSAPNLVAMR TKDGVATLSD LVRSSLRFRP DRIPIGEVRG SEALDLLKAW
GTGHPGGAGT IHAGSAIGAL RRLEQLIQEA VVTVPRALIA ETVDLIAVLS GRGAARRLSE
LSAVEGLGPD GDYRLKPATP SHDGDEI
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