Gene Meso_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3769 
Symbol 
ID4180974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4072765 
End bp4073508 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID638069662 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_676302 
Protein GI110636094 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTCC TGGCAGACGA GACAGTGGTT GTAACCGGAT CATCGAGCGG AATTGGCGCT 
TCAGTTGCCC GTGCCTTTGC ACGGGAGGGC GCTAAGGTCG TCATTACCGG AAGACGCAAG
GAACGTCTGG ACGAACTTGC GCAGGAACTC ACGAATGACG GCGGACAGAT CGAACCGGTT
GCGGGGGATA TCACCGTCCG CGAGGAGGTG GATCGTCTTT TCGAGCGCTG CAAGCAGCGC
TTCGGACCGG TTTCGATCCT GGTGAATTGC GCCGGCATTA TGCTCGCCAG CCGGTTCGAG
CGCGGTCAAA TCGACGACTG GGAGTACATG AACAAGCTCA ATGTCATGTC GCTCTTCTAC
ACGTCCTATC GCGCAATCGA TCAGATGAAA TCGAACGGAG GCGGCAGCAT CATTCATATC
GGCAGCAGCG CAGCCCTTCG GCAGAGGCCG CTCACTGGCG CATATGCAGG CACCAAGGCA
GCGATCCGCG CCGCGGCGGA TTCAATGCGG CAGGAAGTGA TCGAGCACAA GATACGTGTC
TGCACGATTA TGCCGGGGGC CGTTGCCACC GATCTTGTCA GTCACATTAC CGATCCCGAG
TCTCAGGCGG GTTTCGCACA GGTGCTCAAG ATGGAACGGC TTCAGGCCGA GGATATCGCA
AACATCGTGA CGTTCGTGGC GCGGCAGCCG GCCTATGTCA ACATCAACGA GGTCGTCGTG
CGCCCCTTAG CGCAGCAACT GTGA
 
Protein sequence
MRFLADETVV VTGSSSGIGA SVARAFAREG AKVVITGRRK ERLDELAQEL TNDGGQIEPV 
AGDITVREEV DRLFERCKQR FGPVSILVNC AGIMLASRFE RGQIDDWEYM NKLNVMSLFY
TSYRAIDQMK SNGGGSIIHI GSSAALRQRP LTGAYAGTKA AIRAAADSMR QEVIEHKIRV
CTIMPGAVAT DLVSHITDPE SQAGFAQVLK MERLQAEDIA NIVTFVARQP AYVNINEVVV
RPLAQQL