Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3700 |
Symbol | |
ID | 4180884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3993154 |
End bp | 3994023 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638069593 |
Product | SMP-30/gluconolaconase/LRE-like region |
Protein accession | YP_676233 |
Protein GI | 110636025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTTT TTTTCGAAGC AGGAATGGAA ACTGGCGAAG GGCCGATTTG GGACCCGAGA AATGGCACGC TGTATTGCGT GGATTCTACC AACCCGGCTC TTTGGGCCTT TGTACCCGGA TCCAACCAGG TTCGCCGCTA CGCGCTTCCA CAGCAGGTCG GGTTCGCGGC GCTTACATAT AAGGTCGATA CTGTAGTCCT GGGCCTCGAG GACGGCCTAT ATGCCTACGA TCTGAACCGT CGGGAACTAC GGTTGATCAT CGATCCCGAA CCCGGCATCG CCGGCAACCG CATCAATGAC GGCACCGTCG ACATCGATGG CGGCCTTATC TTCGGTACTT TGGACCTCGG CTTAAGGAAT CCGACCGGGT CAGCATACAA GTTGTTCCCG GACGGGCGCC TCCTGAAATT CGACGAAGGC TATATTGTCT TCAACGGACC GTTCGCCGAT CCCGCCAACC CGCGCATCTT TACAGTCAAT TCCGAAGTGC ACGAAGTGTA CGTATTCGAC CGCGAGGCCG ACGGTTCCTT CACAAACAAG CGGTTGTTCA CGGAATGGCC GAGAGAATGG GGCATCCCCG ATGGTCTCGT CATGGATTCA GCCGGCAATG TCTGGATCGC TCACTGGGAT GGCAGTAGAA TCACGCGTTT CTCGCCAAGC GGTCGATATG AAGCCCATAT TGAGCTACCC GTGGGCCGGG TGACAAAAAT CGCATTCGGC GGTGAGGATC TCCGAACCAT TTATGCAACC ACCGCGAATA GAGGCGTGGA ACGCAGGTTA CAGCCCCTCG CTGGGAGTGT ATTCCGGCTT GAACAAGATT ATCGCGGGCT TGGGCCTCGG TTTGTCGCCG ACACTTTGCT GGCACTCTGA
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Protein sequence | MDVFFEAGME TGEGPIWDPR NGTLYCVDST NPALWAFVPG SNQVRRYALP QQVGFAALTY KVDTVVLGLE DGLYAYDLNR RELRLIIDPE PGIAGNRIND GTVDIDGGLI FGTLDLGLRN PTGSAYKLFP DGRLLKFDEG YIVFNGPFAD PANPRIFTVN SEVHEVYVFD READGSFTNK RLFTEWPREW GIPDGLVMDS AGNVWIAHWD GSRITRFSPS GRYEAHIELP VGRVTKIAFG GEDLRTIYAT TANRGVERRL QPLAGSVFRL EQDYRGLGPR FVADTLLAL
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