Gene Meso_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3700 
Symbol 
ID4180884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3993154 
End bp3994023 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content56% 
IMG OID638069593 
ProductSMP-30/gluconolaconase/LRE-like region 
Protein accessionYP_676233 
Protein GI110636025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTT TTTTCGAAGC AGGAATGGAA ACTGGCGAAG GGCCGATTTG GGACCCGAGA 
AATGGCACGC TGTATTGCGT GGATTCTACC AACCCGGCTC TTTGGGCCTT TGTACCCGGA
TCCAACCAGG TTCGCCGCTA CGCGCTTCCA CAGCAGGTCG GGTTCGCGGC GCTTACATAT
AAGGTCGATA CTGTAGTCCT GGGCCTCGAG GACGGCCTAT ATGCCTACGA TCTGAACCGT
CGGGAACTAC GGTTGATCAT CGATCCCGAA CCCGGCATCG CCGGCAACCG CATCAATGAC
GGCACCGTCG ACATCGATGG CGGCCTTATC TTCGGTACTT TGGACCTCGG CTTAAGGAAT
CCGACCGGGT CAGCATACAA GTTGTTCCCG GACGGGCGCC TCCTGAAATT CGACGAAGGC
TATATTGTCT TCAACGGACC GTTCGCCGAT CCCGCCAACC CGCGCATCTT TACAGTCAAT
TCCGAAGTGC ACGAAGTGTA CGTATTCGAC CGCGAGGCCG ACGGTTCCTT CACAAACAAG
CGGTTGTTCA CGGAATGGCC GAGAGAATGG GGCATCCCCG ATGGTCTCGT CATGGATTCA
GCCGGCAATG TCTGGATCGC TCACTGGGAT GGCAGTAGAA TCACGCGTTT CTCGCCAAGC
GGTCGATATG AAGCCCATAT TGAGCTACCC GTGGGCCGGG TGACAAAAAT CGCATTCGGC
GGTGAGGATC TCCGAACCAT TTATGCAACC ACCGCGAATA GAGGCGTGGA ACGCAGGTTA
CAGCCCCTCG CTGGGAGTGT ATTCCGGCTT GAACAAGATT ATCGCGGGCT TGGGCCTCGG
TTTGTCGCCG ACACTTTGCT GGCACTCTGA
 
Protein sequence
MDVFFEAGME TGEGPIWDPR NGTLYCVDST NPALWAFVPG SNQVRRYALP QQVGFAALTY 
KVDTVVLGLE DGLYAYDLNR RELRLIIDPE PGIAGNRIND GTVDIDGGLI FGTLDLGLRN
PTGSAYKLFP DGRLLKFDEG YIVFNGPFAD PANPRIFTVN SEVHEVYVFD READGSFTNK
RLFTEWPREW GIPDGLVMDS AGNVWIAHWD GSRITRFSPS GRYEAHIELP VGRVTKIAFG
GEDLRTIYAT TANRGVERRL QPLAGSVFRL EQDYRGLGPR FVADTLLAL