| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3687 |
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| Symbol | |
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| ID | 4180871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3975340 |
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| End bp | 3976962 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638069580 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_676220 |
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| Protein GI | 110636012 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCA CAAGCCCTGA CGTTGAGGTG CACTCATCGC AAGAGCCATG GTGGCGGCGC
GGCGTCATCT ACCAAATCTA TCCGCGCTCC TTTCAGGACA GCAATGGCGA CGGCATCGGC
GACATCCGCG GCATCATAGA TCGCCTGGAC TACCTCGTCT GGCTCGGGAT AGATGCCGTC
TGGATTTCGC CGATCTTCTT CTCGCCAATG GCCGATTTCG GCTATGACAT CGCGGATTAT
CGCAAGATCG ACCCTCTTTT CGGTACGCTC ACGGATTTCG ACCAGCTCAT TGAAGCCGCG
CATCGGCGTG GAATTCGGAT ATTGCTCGAC TATGTGCCGA ACCACTCCTC AGACCGTCAT
CAATGGTTTC TGGAGGCGCG CAGCTCCCGC GATAATCCTC GGCGCGATTT CTACATATGG
CGGGATGCGG CGCCGGACGG GGGACCGCCA AACAACTGGC AAAGCGAATT CGGCGGCAGC
GCATGGGAAC TGGATGCCGC AACCGGCCAA TATTACTACC ATGCCTTCCT GAAAGAGCAG
CCCGATCTAA ACTGGCGCAA TCCAGAAGTG CGCCGTGAAA TGTACGACGT GCTCCGCTTC
TGGCTGGACC GGGGCGTCGA CGGTTTTCGC GTCGATGTCA TGTGGCATCT CATCAAGGAC
GCGGAGTTTC GCGACAATCC GCAGAACCCC GACTGGACCG AAGACATGCC GCCGCACAAG
TCGGTGCTTT CGATCTATTC CTGCGATCAG GAGGAGGTGC ACGACGTAGT CTCCGAAATG
CGCGCCGTGC TGGACGAATA CGGGGGCGAC CGGCTGCTTA TCGGAGAAAT ATATCTGCCG
ATTGCCCGGC TCGTCGCCTA TTATGGCCGG GATCTTCGCG GTGCGCACCT GCCGTTCAAT
TTCCGCCTTA TTGAGGCGCA ATGGGACGCT CGCCACATCG AGCGGCAGAT TGTCGAATAC
GAGGCCGCTC TGCCGGAGGG CGGCTGGCCG AACTGGGTTT TGAGCAATCA CGATAAGCCG
CGTATCGCCT CCCGTGTCGG CCGGGACCAG GCGCGTGTTG CCGCCATGAT GCTACTTACG
TTGCGCGGCA CGCCAACCAT CTATTATGGC GACGAGATCG GGATGAACGA CGCTCCCATT
CCGCCTGAGC GCGTGCAGGA CCCGTTCGAG CTGCGCGTTC CCGGACGCGG TTTCGGGCGT
GATCCCCAAC GCACGCCTAT GCAGTGGGAC AATACGGTGA ATGCAGGCTT CAGCACCGGC
TCGCCTTGGC TTCCTCTTGC CCCGGACAAG GACAGCTTCA ATGTGGAGGC GGAACGCAGC
GATCCGCACT CAATGCTGTC GCTCTATCGC AGGCTGATTG CATTCCGGCG AGAAAATGAT
GCGCTGAACC TTGGCCGTTA CGCCTCCGTC GAGGCAGACA GCTGCGTGCT CGCTTACCTC
CGGGAGACGG AGAATGATCG CTATTTGATT GCACTTAATC TCGGGCCCGA GCCGGCGGTG
CTGGAAACAC CCGGGCAATG CCGGATTGTG ATCAGCACGG AAGGCAAGGC GGAAGGCGAG
ATTGTCGAGG AAAAGCTCCA CCTGCAAGGC AATGAGGGCG TGCTGGCGGA GATGATGAGT
TAG
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| Protein sequence | MKGTSPDVEV HSSQEPWWRR GVIYQIYPRS FQDSNGDGIG DIRGIIDRLD YLVWLGIDAV
WISPIFFSPM ADFGYDIADY RKIDPLFGTL TDFDQLIEAA HRRGIRILLD YVPNHSSDRH
QWFLEARSSR DNPRRDFYIW RDAAPDGGPP NNWQSEFGGS AWELDAATGQ YYYHAFLKEQ
PDLNWRNPEV RREMYDVLRF WLDRGVDGFR VDVMWHLIKD AEFRDNPQNP DWTEDMPPHK
SVLSIYSCDQ EEVHDVVSEM RAVLDEYGGD RLLIGEIYLP IARLVAYYGR DLRGAHLPFN
FRLIEAQWDA RHIERQIVEY EAALPEGGWP NWVLSNHDKP RIASRVGRDQ ARVAAMMLLT
LRGTPTIYYG DEIGMNDAPI PPERVQDPFE LRVPGRGFGR DPQRTPMQWD NTVNAGFSTG
SPWLPLAPDK DSFNVEAERS DPHSMLSLYR RLIAFRREND ALNLGRYASV EADSCVLAYL
RETENDRYLI ALNLGPEPAV LETPGQCRIV ISTEGKAEGE IVEEKLHLQG NEGVLAEMMS
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