Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3682 |
Symbol | |
ID | 4181023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3969824 |
End bp | 3970609 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069575 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_676215 |
Protein GI | 110636007 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGATA AGGCAGGGCT GGCCGTGATT ACCGGCGCAT CCACCGGTAT TGGTTACGAA CTGGCGAAAT GTTGCGCGGC GGCAGGTTAC GACATGGTGG TGGCCGCCGA CGAGCCAGAG ATCGCCCGCG CAGCGGAGGA GTTCCGCGCT ATGGGCGTCA ATGCGGAGCC GGTGGAAGCG GATCTTGCCA CGGCGGAAGG CGTGGAAAAG CTTTACGTGG CGCTCTCCGG ACGCCCGGTG GAATTGCTCT TCGCCAATGC CGGCAGGGGC TTGGGTCACG CTTTTCTCGA CCAGGAGGTG GCCGAGATCA GGCACGTGAT CGATACCAAC ATCACCGGAA CCATTCTTCT GGTGCATCGA ATAGGCCGTG ATATGCGGCT CAGGAATCGC GGGCGCATCC TCTTCACGGG TTCGATCGCC GGTTTCATGC CGGGCAGCTA TCAGGCGGTC TACAACGCCA CAAAGGCTTT CGTAGACAGT TTTTCCTGGG CGCTTCGCAA CGAGCTCAAG GATACGGACA TCACCGTCAC CTGCCTCATG CCCGGCCCGA CCGATACCGA GTTCTTCGAG CGGGCCGAAA TGACGGACAC AAAGGTCGGC TCGGAGAAAA AGATGAATCC CGCCAAGGTC GCGCGCATCG GGTTTGAGGC CATGATGAAG GGCGAGGCCG GTGTCGTAGC CGGCTTCTCA AACAAGATTC AGGCGGCCAT GGCACACCTG ATGCCTGCCG GGCTACTCGC CGAGCAGCAC CGGAAAATGG CGCAGCCGGG GACCGGGGAA ACGTAA
|
Protein sequence | MADKAGLAVI TGASTGIGYE LAKCCAAAGY DMVVAADEPE IARAAEEFRA MGVNAEPVEA DLATAEGVEK LYVALSGRPV ELLFANAGRG LGHAFLDQEV AEIRHVIDTN ITGTILLVHR IGRDMRLRNR GRILFTGSIA GFMPGSYQAV YNATKAFVDS FSWALRNELK DTDITVTCLM PGPTDTEFFE RAEMTDTKVG SEKKMNPAKV ARIGFEAMMK GEAGVVAGFS NKIQAAMAHL MPAGLLAEQH RKMAQPGTGE T
|
| |