| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3639 |
|---|
| Symbol | |
|---|
| ID | 4181986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3930803 |
|---|
| End bp | 3932341 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638069533 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_676173 |
|---|
| Protein GI | 110635965 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.917263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTC CGTTTCTCCG AATCTTCGAC CTTGCGCAGA TGGACCCAGA GCGCCTCTAT
GCACGCTTCG GAGAACGCGA CATCACCATA GGGGACGTTG CGAGAAATTC CGAAGCCGTC
GCACGGATCC TGCTTGCTTC TGGACTCACG CCCGGTGCCC GCGTCGCGGT GATGATGGAG
AACCGCCCCC TTACAATCTC ACTGATCTTC GGCATCGCGC GGGCCGGCAT GGTCTGGGTG
CCGATCAACA CGCGCCAGCA AGGCGATTCC CTTGCTTATC AACTGGGCCA TTGCAGACCC
GCATTGCTAA TCGTTGACGA GGCGCTACTG GCGAAAGTGC GCGATTGCGG GGCGGACGAC
GGCCACCTGG CGATCCATTC CCTGGCCGAC GATGCAGACA CGCTCGACCT CCCGAATAAT
GGCCGCGCCG ATGCCTTGCC TGCCCCTGTG GAAGCCGGCG AGACCTTCGC GATTATGTAT
ACGTCCGGCA CCACCGGAGC GCCGAAAGGC GTACAGGTTA CGCACCGCAT GTTCGACTAC
GCCGCCAGGG CAGTCTCGAT CGCCGGCGGG ATCGAGGACG GCGACGTCAT GTTCGTGTGG
GAGCCGCTCT ACCACATCGG CGGCAGTCAG CTTCTCCTTC TACCGCTGAT GCACCGCGTG
CACCTTCATC TCGTGCGGCG ATTCAGCGCT TCCGGCTTCT GGGGCGACGT GCATGCCAGC
GGCGCCACCC ACATTCATTT CCTCGGTGGG ATTCTGCAGA TCCTGCTGCG CAATCCTCCC
TCACCGAACG ACAGGGGACA CCGCGTGCGT GTCGCCTGGG GCGGCGGCTG CGCGAGGGAC
GATTGGCAGG CGTTCGAACA CCGCTTCGGT GTCGACATCC GCGAAGCCTA TGGGATGACC
GAGGCTTCGA GCATAACGAC AATCAATGTC GGCGGCCCGG TCGGATCGGT CGGCAAGCCG
GTGCCTTGGT TCAAGGTCGA ACTGCTCGAC GAGGCAGGAC AGCCGGTGCC GCCTGGCGAG
CGCGGCGAGA TTGTCGTGAG CGAACTCGAA GAAGGCGCGC TCTTCAAAGG CTATCTCGAC
GCGCCCGAGG CAAACGCGCG CGTGCTGCGC GGCGGCCGGC TCTTCACGGG CGATGTCGGC
ATTTTCTCCG AGGATGGCTG GCTGACATTC CAGGGGCGGC TGAACGACTC GATCCGCCGC
CGCGGAGAGA ACATCTCCGC ATGGGAGATC GAAAGCGCCG CCCTCAAACA TCCAGCCATA
GCAGAGGTGG CGATGATCGG CGTGAAAGCC GACATCGGCG AGCAGGAGAT AAAGCTGTTC
GTCCGACCGG CCGACGGACA CTCCATCGAT GCTCCGCAGC TGCACGGCTG GCTGACGGAA
CAGCTCGGCC GCTATCGCGC TCCACGCTAC ATCGCCTTCG TGGATAGTTT TCCGAAAACA
CCCAGCGAGC GCATCCGAAA GGGATTGCTC CCCCAAACCA CGGACGATTG CTGGGATGCC
GAATCGCACG CCCGCACCCT CCTGACGAGG ACCGCATGA
|
|---|
| Protein sequence | MTSPFLRIFD LAQMDPERLY ARFGERDITI GDVARNSEAV ARILLASGLT PGARVAVMME
NRPLTISLIF GIARAGMVWV PINTRQQGDS LAYQLGHCRP ALLIVDEALL AKVRDCGADD
GHLAIHSLAD DADTLDLPNN GRADALPAPV EAGETFAIMY TSGTTGAPKG VQVTHRMFDY
AARAVSIAGG IEDGDVMFVW EPLYHIGGSQ LLLLPLMHRV HLHLVRRFSA SGFWGDVHAS
GATHIHFLGG ILQILLRNPP SPNDRGHRVR VAWGGGCARD DWQAFEHRFG VDIREAYGMT
EASSITTINV GGPVGSVGKP VPWFKVELLD EAGQPVPPGE RGEIVVSELE EGALFKGYLD
APEANARVLR GGRLFTGDVG IFSEDGWLTF QGRLNDSIRR RGENISAWEI ESAALKHPAI
AEVAMIGVKA DIGEQEIKLF VRPADGHSID APQLHGWLTE QLGRYRAPRY IAFVDSFPKT
PSERIRKGLL PQTTDDCWDA ESHARTLLTR TA
|
|---|
| |