| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3619 |
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| Symbol | |
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| ID | 4181216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3905010 |
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| End bp | 3905753 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638069513 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_676153 |
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| Protein GI | 110635945 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00790972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AAGTTCTTGT TCTTACAGGC GGTGCGTCGG GTATCGGGCG CGGCATTCTG
GACCACGCGG TCAGGGCTGG ATGGCATACA GCCGTCTTCG ATCTACCCGG CGAGGCCCTG
GACGCACTTC GAGATACTTT TTCGATGGAT GACGTCACGA CCTTCGGCAT CGATGTCACA
GACGAGAACG CGGTCGACGC AGCGGTGCGA AAGGTTGCCG AACCATTCGA GCGCATTGAC
GGGGTCGTCA ACTGCGCCGG CATCGGACAA AATATTCCTT TTAACGAGAC AACACCGGCG
CAGTTTCGCA AGGTTCTCGA CGTCAATGTC ATCGGGTCTT TCATCGTAGC GCAATCAGCT
GTGAGACACA TGAGCAATGG CTCGGTGGTG AACATCACCT CTGTCTCCGG AATCCAGGGC
AGCGTCGGTC GTGTTGCTTA TGGTGCCTCG AAAGGTGCGG TAAACACGAT GACCCGCATT
ATGGCGGTGG AACTCGCCCC TCATGGCGTA CGTGTCAATG CCATTGCTCC CGGACCCGTT
GAAACGCCGA TGGCGCAGAA ATGGCACGAT GAAAAGACGA GGAACGATTG GAAATCGCGC
GTTCCGCTCG GCCGGTACGC CTCAGTCGAC GAAATTGCGT CGATGGCGAT GGTTCTGCTG
GACGACAATC TGTCGTCCTA TGTCAACGGT CAAGTGATCG CTGTGGACGG AGGCTTTACC
GTCTCGGGTT TGATGGCACC GTAG
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| Protein sequence | MKKKVLVLTG GASGIGRGIL DHAVRAGWHT AVFDLPGEAL DALRDTFSMD DVTTFGIDVT
DENAVDAAVR KVAEPFERID GVVNCAGIGQ NIPFNETTPA QFRKVLDVNV IGSFIVAQSA
VRHMSNGSVV NITSVSGIQG SVGRVAYGAS KGAVNTMTRI MAVELAPHGV RVNAIAPGPV
ETPMAQKWHD EKTRNDWKSR VPLGRYASVD EIASMAMVLL DDNLSSYVNG QVIAVDGGFT
VSGLMAP
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