Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3580 |
Symbol | |
ID | 4181409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3854482 |
End bp | 3857610 |
Gene Length | 3129 bp |
Protein Length | 1042 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638069473 |
Product | DNA helicase/exodeoxyribonuclease V, subunit B |
Protein accession | YP_676114 |
Protein GI | 110635906 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.412943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACGG AACGAAATAG CCCGCGCGTC TTTTCCATTC CCCCCGGCGT GCCGTTTTTG CCGGCTCTTG CCGACGCGCT GCTCCAGGGT CGCCTGGTGC CCGGCTTCCG CTATGATGGC GACCCGCTTT CGCTCGCCGA CGCCACGATT TACCTTCCCA CCCGCCGCGC GGCACGGGAG CTGAGAAGCG TCTTCGTCGA CCGTCTTGGG GGTGTGTCCG CCATCCTCCC CGTCATCCGC CCGCTTGGTG AGTTCGAGGC TGAGCTGGCC GATTTGAGCG ATGAAGGCGG CGCTGCTCAA CTTGACCATG CGCCACCCAT TCCCAAGCTT GACCGCATCC TCCTCCTTGG AAGCCTCGCG CAGGCGTGGA AGGCGCGCGT GCCTGCGCAT GTGGCCGCTC GCTTTGAGGA AGGTGTGATC GTGCCCGCCT CCCTGAGCGA CGGCCTTTGG CTTGCGCGCG ACCTGGCCGC TCTCATGGAC GAGATCGAGA CCGAGGAGGG TGACTGGAGC CGGCTTGCCG AACTCGTGCC GGAGGAGCTT GCCGGCTGGT GGCAGGTGAT GCTCGAATTC CTTAATATCG TTACCAGGGC CTGGCCTGAA CTGCTTGCCG AGCGAGACCG CTCAAACCCC GCCACGCACC GCAATGCAAT GCTCGCAGCC GAGGCTGCCC GGCTCATGCG AACCCCACCG CGGGGACCTG TCATCGCGGC TGGGTCTACG GGCTCAATCC CGGCAACCGC ACGACTGCTC GGCACCATTG CCCGGCTCGA AAACGGCGCC GTGGTTCTGC CGGGGCTCGA CCTCAATCTG GACGAAGATT CCTGGCGCGC GGTCGGTGCA ATCGAAGGGC CATCCGCTTG CGGGCATCCG CAGTTCGGCC TCAGGAAGCT GATCGGGACC ATCGGCGTGG CGCGCGCGCA GGTTCTGGAG CTTGCTGCGC CGGCCCCGGA GCTTGCCGCT CGCCGCCAGC TCCTGAGCGA GGCGATGCGG CCGGCCGATA CCACCGATCT TTGGGCGTTA AATCGCTCGA TGGTCGACCG GGCGCTATCG CAAGGTGCGC TTGCCGGCGT CAGTCTGATC GAGGCTGCGA ACGAACGGGA CGAGGCGGCG GCAATTGCCG TCGCCCTGCG CCACGCCATT GCCCGAGAGG GGACAACGGC GGCATTGGTC ACACCCAACA GAACATTGGC GCGCCGGGTG GCCGCCGAAC TCAAACGGTT TGGTATCCGT GCCGACGACT CTGGCGGAAG CCTGCTTGCC GACAGCGTGC CCGCCACACT GCTCCGCCTG ATGCTGGAGG CCATCTGCCG GCCGAAGGAA CCGGTGGTAA TCGTGGGGCT CTTGAAGCAT CCACTGCTTC GCCTGGGCTT GCCGAGAGAG CGCGTGCGCC GCGCTGCCGA GGTGATCGAG CTGATGGCCT TGCGCGGCGG AACAGGCCGG CCTGACGTGG CAACGCTGTC TAGCCTCTTC GCCCAGCGCC ATGATGCGAT GATGCGCGAT CCTCGCAAGC CGTTCTGGCT AAGCCGGCTA AGCGCTTCCG ATATCGCCGA AGCTCGCCAG GTGCTTGCCG CCCTGGAACA GGCAATCGTC CCGCTCTCCA GCCTGCGGGA GGCAGCTGCT GTCGGCCTGT CCCTATTGGC GCGCGCCTCG GTGGAAGCGT TTGAAGCGCT GGCAAGGGAT GAGGACGGAA CGCTCAACGA ACTCTACCGG GGCGAGGCGG GCGAGGCCCT TGCCCGCTTC CTTCGGGATC TGGTGGAGTG CCGGACCGGC ACGAAGGCGG AGATTTCCGA ATGGCCGGAC GTTTTCGCCG CCCTGATGGC GGGCGAGGTC GTGAAACCCG CCATGGGCGC CGACCAGCGC ATCGCCATCT GGGGCGCGCT GGAGGCCCGC CTGCAAAGCG TCGATATGCT CGTATTGGGC GGACTTAATG AAGGCACGTG GCCGGAGGCG CCGCGGTCTG ACCGCTTCAT GTCGCGCCTC ATGAAAGGTG AGCTCAAGCT GGAGCCGCCG GAGCGGCGCA TCGGCCTTGC CGCGCATGAT TTCATGATGG CGTTCGGTGC GCCGCAAGTG GTGCTTGCCC GCTCGACCAG ATCGGAGAGC GCCCCCGCCG TCGCCTCACG CTGGCTGCAG CGGCTTGCCG CCTGCGCCGG GCCATCGGAA ACCGCCGCCA TGCGCGCGCG CGGCCAGCGC TTTATTGCCT GGGCGCATGC GCTGGAGGCC CGCGATGACG TGCCTTTTGC TCCCCGCCCC TGCCCCAGGC CGCCGCTCGA GGCGCGGCCA AAGCGCTTCT CCGTCACCGA AATCGAGACG CTAAGGCGTG ATCCTTATGC CGTGTATGCG CGGCGAATCC TCAAGCTGAT GCCGCTCGAT CCGCTCATCC GCGATCCGGG CGCCGCAGAA CGCGGCACCC TGTTTCACGA TATTTTGCAA GCCTTTATCC AATCTGGCGC GGACCCTTCC GCTCCCGATG CGCTGGAACG GCTGCTCGAT GCCGGAAAAA AGCTGTTTGC AGAAACGAAG CTCCCGGTTG ATGTGGAGGC GGTCTGGTGG CCGCGTTTTG AGCGCACCGC TTACGGCATC ATCGGCTGGG AGCGCGGACG CGCGGAAGCC GTTGCCGCTC GGCATGCGGA AATCCGCGCC TCGGCCATCG AGGTCGGCGC CACTGGCAAG CTGCTTTCGG GCCGCGCTGA CCGTATCGAC ATCCGCGCGG ATGGAAGCGC CGAGATCATC GACTATAAAA CCGGCTCCAC CCCCTCAAAG GTGCAGGCAC ACCGGCTTCT TGCCCCGCAG CTTGCCCTTG AAGCAGCGCT TCTTGCCCGC GGCGCTTTTG TGGAGCTTGG GCAGGCGCAA CCAGCCGAGC TTTGTTATGT GCGGCTGAAG GCGAATGGCA CCGTGGAGCC GGAATCCATC CTCAAGATCA AGGACAGCGA GAAAGCGGGA CCCGAAATCG CCGAGGAAGC CTGGCAGCGG CTGGAGCGGC TGCTTGCATG GTACGATAAT TCGGAAGCCG GCTATCTTTC CCGCGCCTTA CCGTTCAAGG AAGGGGACAC GGAAGGGGAT TACGACCATC TTGCCCGCGT GCTCGAATGG TCGGCTGGCG GAGATTCCGG AGAAGGGGAG GCGGAATGA
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Protein sequence | MSTERNSPRV FSIPPGVPFL PALADALLQG RLVPGFRYDG DPLSLADATI YLPTRRAARE LRSVFVDRLG GVSAILPVIR PLGEFEAELA DLSDEGGAAQ LDHAPPIPKL DRILLLGSLA QAWKARVPAH VAARFEEGVI VPASLSDGLW LARDLAALMD EIETEEGDWS RLAELVPEEL AGWWQVMLEF LNIVTRAWPE LLAERDRSNP ATHRNAMLAA EAARLMRTPP RGPVIAAGST GSIPATARLL GTIARLENGA VVLPGLDLNL DEDSWRAVGA IEGPSACGHP QFGLRKLIGT IGVARAQVLE LAAPAPELAA RRQLLSEAMR PADTTDLWAL NRSMVDRALS QGALAGVSLI EAANERDEAA AIAVALRHAI AREGTTAALV TPNRTLARRV AAELKRFGIR ADDSGGSLLA DSVPATLLRL MLEAICRPKE PVVIVGLLKH PLLRLGLPRE RVRRAAEVIE LMALRGGTGR PDVATLSSLF AQRHDAMMRD PRKPFWLSRL SASDIAEARQ VLAALEQAIV PLSSLREAAA VGLSLLARAS VEAFEALARD EDGTLNELYR GEAGEALARF LRDLVECRTG TKAEISEWPD VFAALMAGEV VKPAMGADQR IAIWGALEAR LQSVDMLVLG GLNEGTWPEA PRSDRFMSRL MKGELKLEPP ERRIGLAAHD FMMAFGAPQV VLARSTRSES APAVASRWLQ RLAACAGPSE TAAMRARGQR FIAWAHALEA RDDVPFAPRP CPRPPLEARP KRFSVTEIET LRRDPYAVYA RRILKLMPLD PLIRDPGAAE RGTLFHDILQ AFIQSGADPS APDALERLLD AGKKLFAETK LPVDVEAVWW PRFERTAYGI IGWERGRAEA VAARHAEIRA SAIEVGATGK LLSGRADRID IRADGSAEII DYKTGSTPSK VQAHRLLAPQ LALEAALLAR GAFVELGQAQ PAELCYVRLK ANGTVEPESI LKIKDSEKAG PEIAEEAWQR LERLLAWYDN SEAGYLSRAL PFKEGDTEGD YDHLARVLEW SAGGDSGEGE AE
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