Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3558 |
Symbol | |
ID | 4181806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3831943 |
End bp | 3832830 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638069452 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_676093 |
Protein GI | 110635885 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.727517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCCT TGCGCAGGCA CCTGCCGCAA TACCTGATGA TCGCACCCTT CGTTGTGCTG TTCGTGGCCT TCTTCCTGTA TCCGATCGTG AGCGGCTTCT ACTACAGCTT TCACGACTGG AACGGGGTCG ACGCACCGCG TTTCATCGGG CTTGCAAATT ACGAGAAGCT TCTCGGATCG CGCGATTTCG GTCGCGCGAT GGGAAATCTC GCGACTTACA TATCGATCAC GGTTCCACTT GGCATCCTCG TGGCTTTCGG GCTCGCCCTG CTGGTCGACA GCTTTACCGG GCGTTGGGCG AGCTTCTTCC GCAACGCGTA TTTCGTCCCG GTGGTACTGC CCGCCTTTCT GGCGGCGACG ATCTGGCGCT GGATCTACGC TCCGAACTTC GGCCTTCTCA ACATGATCCT CGGCTGGTTC GGCATCCCGT CTATAAACTT TCTGAACGAC ACCGACTCGA TGATCTACGC GCTCATCGCC GTCGATGTCT GGGTTTCGGC CGGCTTCAAC ATGGTCATCT TCCTGGCCGG CTTGAAGAAC ATACCGGGCG AACTCTATGA AGCTGCCCGG CTTGACGGCG CCAACAAGTG GCAGCAGATC GTCCATATCA CAGTGCCGAT GCTGGGCCCG GTCATGTTCT TCGTGATCAC CTACAGCATC ATCTCGGCCA TGCAGGTTTT CGACAAGCCG TGGCTACTTA CCGGCTCGTC CTTTGCCGAA TATGGCGGCC GCCGCGGCGC GCTGCTCTTC CCCGTGATGG ACATGATGGG GCGCGCCTTC GGGGAGGTCC ACTTTGGGGA GGCGGCAGCA TATGGCTTCC TGCTGACCGT CGCGATCATC CTTCTCACGC TGGCCTCCTT CGCGGTTCGC AAGTGGAGGC GCTCATGA
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Protein sequence | MPSLRRHLPQ YLMIAPFVVL FVAFFLYPIV SGFYYSFHDW NGVDAPRFIG LANYEKLLGS RDFGRAMGNL ATYISITVPL GILVAFGLAL LVDSFTGRWA SFFRNAYFVP VVLPAFLAAT IWRWIYAPNF GLLNMILGWF GIPSINFLND TDSMIYALIA VDVWVSAGFN MVIFLAGLKN IPGELYEAAR LDGANKWQQI VHITVPMLGP VMFFVITYSI ISAMQVFDKP WLLTGSSFAE YGGRRGALLF PVMDMMGRAF GEVHFGEAAA YGFLLTVAII LLTLASFAVR KWRRS
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