Gene Meso_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3558 
Symbol 
ID4181806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3831943 
End bp3832830 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content59% 
IMG OID638069452 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_676093 
Protein GI110635885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.727517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCCT TGCGCAGGCA CCTGCCGCAA TACCTGATGA TCGCACCCTT CGTTGTGCTG 
TTCGTGGCCT TCTTCCTGTA TCCGATCGTG AGCGGCTTCT ACTACAGCTT TCACGACTGG
AACGGGGTCG ACGCACCGCG TTTCATCGGG CTTGCAAATT ACGAGAAGCT TCTCGGATCG
CGCGATTTCG GTCGCGCGAT GGGAAATCTC GCGACTTACA TATCGATCAC GGTTCCACTT
GGCATCCTCG TGGCTTTCGG GCTCGCCCTG CTGGTCGACA GCTTTACCGG GCGTTGGGCG
AGCTTCTTCC GCAACGCGTA TTTCGTCCCG GTGGTACTGC CCGCCTTTCT GGCGGCGACG
ATCTGGCGCT GGATCTACGC TCCGAACTTC GGCCTTCTCA ACATGATCCT CGGCTGGTTC
GGCATCCCGT CTATAAACTT TCTGAACGAC ACCGACTCGA TGATCTACGC GCTCATCGCC
GTCGATGTCT GGGTTTCGGC CGGCTTCAAC ATGGTCATCT TCCTGGCCGG CTTGAAGAAC
ATACCGGGCG AACTCTATGA AGCTGCCCGG CTTGACGGCG CCAACAAGTG GCAGCAGATC
GTCCATATCA CAGTGCCGAT GCTGGGCCCG GTCATGTTCT TCGTGATCAC CTACAGCATC
ATCTCGGCCA TGCAGGTTTT CGACAAGCCG TGGCTACTTA CCGGCTCGTC CTTTGCCGAA
TATGGCGGCC GCCGCGGCGC GCTGCTCTTC CCCGTGATGG ACATGATGGG GCGCGCCTTC
GGGGAGGTCC ACTTTGGGGA GGCGGCAGCA TATGGCTTCC TGCTGACCGT CGCGATCATC
CTTCTCACGC TGGCCTCCTT CGCGGTTCGC AAGTGGAGGC GCTCATGA
 
Protein sequence
MPSLRRHLPQ YLMIAPFVVL FVAFFLYPIV SGFYYSFHDW NGVDAPRFIG LANYEKLLGS 
RDFGRAMGNL ATYISITVPL GILVAFGLAL LVDSFTGRWA SFFRNAYFVP VVLPAFLAAT
IWRWIYAPNF GLLNMILGWF GIPSINFLND TDSMIYALIA VDVWVSAGFN MVIFLAGLKN
IPGELYEAAR LDGANKWQQI VHITVPMLGP VMFFVITYSI ISAMQVFDKP WLLTGSSFAE
YGGRRGALLF PVMDMMGRAF GEVHFGEAAA YGFLLTVAII LLTLASFAVR KWRRS