| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3480 |
|---|
| Symbol | aroE |
|---|
| ID | 4179888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3756790 |
|---|
| End bp | 3757629 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638069375 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_676016 |
|---|
| Protein GI | 110635808 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGT CACTTCACCG TGCCTTTATC TGCGGCCATC CGGTGGCCCA CTCTCGTTCC
CCGGTCATTC ACAATTTTTG GCTGAAGCAG CACGGGATAG AGGGGAGTTA TGAGCGTCGC
GACATTGCGC CCGAGGCGTT CTCGCTTTTT ATCCGGGAGT TTCCGCGTTT CTATATGGGT
GGCAATGTTA CCATCCCGCA TAAGGAGAGC GCCTGGCGCT TGGTGGAGAC CCGCGACGAA
GCTGCGGAGA CAATAGGCGC GGTTAACACG CTTTGGCTTC AAGACGGCAG GATTATGGGC
GGCAATACCG ATACCTACGG CTTTGCCGCC AACCTCGATA TGGAATTAGC GGGCTGGGAG
AAGAATGCGG TGGCAACCGT GCTCGGCGCC GGCGGTGCGG CTCTCGCGGT GGTGCATGCG
CTTCAGAGCC GGGGAATTCG CGATATCCGG ATCGTCAATC GCACGGTTTC GCGTGCCCGG
GCTGTTGTGG ACCGGTTCAA GGGCGGCACC AGCGCGCATG CATGGGAAGC GGTCCCAGAC
CTGCTTTCGG ATACCTCGCT CCTTGTCAAT ACCACTTCGC TCGGGATGCA TGGCGGGCCG
GAAGGCCATA TCGATCTTGC GCCGCTCCCG GATTCGGCGA TCGTGACGGA TATTGTCTAT
GTGCCCTTGC GCACGCCTCT TCTCGCTTCG GCGGCAGCAA GGGGCCTGCG TACCGTGGAT
GGGCTGGGCA TGCTCCTGCA CCAGGCAGTT CCAGGGTTTG AGCGATGGTT CGGTGTGCGG
CCCGAGGTCA CGCCTCACCT CCGCGAAATC GTGGTTGCGG ATCTCGAGGC CGGAAAATGA
|
|---|
| Protein sequence | MAESLHRAFI CGHPVAHSRS PVIHNFWLKQ HGIEGSYERR DIAPEAFSLF IREFPRFYMG
GNVTIPHKES AWRLVETRDE AAETIGAVNT LWLQDGRIMG GNTDTYGFAA NLDMELAGWE
KNAVATVLGA GGAALAVVHA LQSRGIRDIR IVNRTVSRAR AVVDRFKGGT SAHAWEAVPD
LLSDTSLLVN TTSLGMHGGP EGHIDLAPLP DSAIVTDIVY VPLRTPLLAS AAARGLRTVD
GLGMLLHQAV PGFERWFGVR PEVTPHLREI VVADLEAGK
|
|---|
| |