Gene Meso_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3405 
Symbol 
ID4183142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3682243 
End bp3682890 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID638069299 
Productthiamine pyrophosphokinase 
Protein accessionYP_675941 
Protein GI110635733 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.465121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAT TTATCATTCT TCTGGGCGGT GAGATCCGAC CTACCCCTCA GCTGCTGGAG 
CAGGTAAAGG GTGCACGGGT CATAGCTGCC GATTCCGGCA TGCTGCATGC CCAGACGCTC 
GGCCTGCGGC CGGAACTCTG GGTGGGCGAT TTCGACTCCC ACCCGGATCG CCTGATTGAG 
GCCTTTCCGG ACGTTACGCG CGAGATCTAT CCTGCCGACA AGGACATAAC GGATGGAGAG 
CTGGCCATCA GAGCAGCCCT CGTTCGCGGT GCTACCTCGT TGGTGCTTGT CGGCGCTTTC 
GGAGGCGCGC GGCCGGATCA TGCGCACCTG CATCTTGCCT TGGCGCTGAA GCTGGCCGAG 
GAGGGTGTGT CCGTTCTGCT GACGAGCGGC AGCCACGAAG GGACCCCGCT CCTCAGCCGG 
CAGCGCTATA TTTTTGGCTA TCCCGAGGGC ACGCTCTTTA GCATTCTTGC GTTCACGGAA 
CTTTCGGGCC TCACCGTAGA GGGCGCGAAG TGGCCGCTCA GTTCGGTTGA CGTTTCTTTC 
GGCTCCTCTC TCGTTTTATC CAACATCGTG CGCGGCGAGC TTGCGGTGAC GCTCAAGCGC 
GGTCGGGCGG TTCTCGTCGC CGACTTCCTA GCAGACGGAA ACACCTGA
 
Protein sequence
MSRFIILLGG EIRPTPQLLE QVKGARVIAA DSGMLHAQTL GLRPELWVGD FDSHPDRLIE 
AFPDVTREIY PADKDITDGE LAIRAALVRG ATSLVLVGAF GGARPDHAHL HLALALKLAE 
EGVSVLLTSG SHEGTPLLSR QRYIFGYPEG TLFSILAFTE LSGLTVEGAK WPLSSVDVSF 
GSSLVLSNIV RGELAVTLKR GRAVLVADFL ADGNT