Gene Meso_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3400 
Symbol 
ID4183137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3676363 
End bp3677775 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content61% 
IMG OID638069294 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_675936 
Protein GI110635728 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.131603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACA CCTATGATGT GGTCGTGATC GGAACCGGTC CGGGTGGCTA TGTTTGCGCC 
ATCAAGGCCG CCCAGCTTGG CCTGAAAACG GCAGTCGTGG AAAAGCGGAC TAACCACGGC
GGCACCTGCG TCAATGTGGG CTGTATCCCT TCAAAGGCGC TGCTGCACGC CACCGAGATG
TTCGCTGAGG CGGGACATTC ATTCGCCGAT CTTGGCATCG ACGTCGGCAC GCCGAAACTC
GACCTGAAAA AAATGCTGGC CCACAAGGAA AAGACGGTCG ATCAGAACGT CAAGGGTCTC
GATTTTCTTT TTAAGAAGAA CAAAATCGAC GTTTTCCGTG GTGCCGGGCG GATTGCCGCC
GCTGGCAAGG TTGTCGTCAC GGGCGAGGAT GGCAAGGAGC AGACGGTCGA GACGAAAAAC
ATCGTTATCG CCACGGGTTC GGATGTCGCC GGCATCCCCG GCGTAGACGT CGATTTCGAT
GAGAGAGTGA TCGTCTCTTC CACCGGCGCC TTGGAACTTC CCGCCGTACC CGCGCGAATG
GTCGTGGTCG GCGGTGGCGT GATCGGGCTG GAGCTCGGCT CAGTCTGGTC GCGGCTGGGC
GCCAAGGTGA CAGTCATAGA ATACCTCGAC ACCATCCTCG GCGGCATGGA CGGCGAGGTC
GCGAAGCAAT TCCAGCGCAT GCTTGCCAAA CAGGGCTTCG GGTTCAAGCT CGGCGCCAAG
GTGACCGGCA TAGCCAAGAC TGAGGGCGGC GCCTCCGTGA CCTTTGAGCC GGCCAAGGGC
GGCGAGGCCG AAACCATTGA TGCGGATGTC GTGCTGGTCG CCACCGGCCG CAAGCCCTAC
ATCGACGGCC TCGGCCTCAA GGAGGCAGGC GTTGAGGTAG ACGAGCGCGG CCGCGTCAAG
ACCGATGGAC ACCTGCGCAC CAATGTGCCC GGCATCTACG CCATCGGCGA CGTAATCACT
GGTCCCATGC TCGCCCACAA GGCGGAGGAC GAGGGTGTTG CCGTAGCCGA GATCATCGCG
GGCCAAGCGG GCCACGTGAA TTATGATGTC ATCCCGTCCG TCGTCTACAC GAGTCCCGAA
GTCGCCTCGG TCGGCAAGAC CGAGGAGGAG CTTAAGAAGG CCGGGATCGA ATACAATGCC
GGCAAGTTTC CTTTCAGCGC CAACGGCCGT GCCCGCTCGA TGCTGCACAC GGACGGTTTC
GTGAAGGTGC TTGCCGATAA GAAGACAGAC CGCGTGCTGG GCGTCCACAT CCTTGGCTTC
GGCGCCGGAG AAATGATCCA CGAAGCAGCG GTGTTGATGG AATTTGGCGG CTCCTCCGAG
GATCTCGCGC GCACCTGCCA TGCGCACCCG ACCATGTCGG AAGCAGTGAA GGAAGCGGCT
CTCGCCACGT TCTACAAGCC GATCCACTCC TGA
 
Protein sequence
MPDTYDVVVI GTGPGGYVCA IKAAQLGLKT AVVEKRTNHG GTCVNVGCIP SKALLHATEM 
FAEAGHSFAD LGIDVGTPKL DLKKMLAHKE KTVDQNVKGL DFLFKKNKID VFRGAGRIAA
AGKVVVTGED GKEQTVETKN IVIATGSDVA GIPGVDVDFD ERVIVSSTGA LELPAVPARM
VVVGGGVIGL ELGSVWSRLG AKVTVIEYLD TILGGMDGEV AKQFQRMLAK QGFGFKLGAK
VTGIAKTEGG ASVTFEPAKG GEAETIDADV VLVATGRKPY IDGLGLKEAG VEVDERGRVK
TDGHLRTNVP GIYAIGDVIT GPMLAHKAED EGVAVAEIIA GQAGHVNYDV IPSVVYTSPE
VASVGKTEEE LKKAGIEYNA GKFPFSANGR ARSMLHTDGF VKVLADKKTD RVLGVHILGF
GAGEMIHEAA VLMEFGGSSE DLARTCHAHP TMSEAVKEAA LATFYKPIHS