Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3400 |
Symbol | |
ID | 4183137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3676363 |
End bp | 3677775 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069294 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_675936 |
Protein GI | 110635728 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.131603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGACA CCTATGATGT GGTCGTGATC GGAACCGGTC CGGGTGGCTA TGTTTGCGCC ATCAAGGCCG CCCAGCTTGG CCTGAAAACG GCAGTCGTGG AAAAGCGGAC TAACCACGGC GGCACCTGCG TCAATGTGGG CTGTATCCCT TCAAAGGCGC TGCTGCACGC CACCGAGATG TTCGCTGAGG CGGGACATTC ATTCGCCGAT CTTGGCATCG ACGTCGGCAC GCCGAAACTC GACCTGAAAA AAATGCTGGC CCACAAGGAA AAGACGGTCG ATCAGAACGT CAAGGGTCTC GATTTTCTTT TTAAGAAGAA CAAAATCGAC GTTTTCCGTG GTGCCGGGCG GATTGCCGCC GCTGGCAAGG TTGTCGTCAC GGGCGAGGAT GGCAAGGAGC AGACGGTCGA GACGAAAAAC ATCGTTATCG CCACGGGTTC GGATGTCGCC GGCATCCCCG GCGTAGACGT CGATTTCGAT GAGAGAGTGA TCGTCTCTTC CACCGGCGCC TTGGAACTTC CCGCCGTACC CGCGCGAATG GTCGTGGTCG GCGGTGGCGT GATCGGGCTG GAGCTCGGCT CAGTCTGGTC GCGGCTGGGC GCCAAGGTGA CAGTCATAGA ATACCTCGAC ACCATCCTCG GCGGCATGGA CGGCGAGGTC GCGAAGCAAT TCCAGCGCAT GCTTGCCAAA CAGGGCTTCG GGTTCAAGCT CGGCGCCAAG GTGACCGGCA TAGCCAAGAC TGAGGGCGGC GCCTCCGTGA CCTTTGAGCC GGCCAAGGGC GGCGAGGCCG AAACCATTGA TGCGGATGTC GTGCTGGTCG CCACCGGCCG CAAGCCCTAC ATCGACGGCC TCGGCCTCAA GGAGGCAGGC GTTGAGGTAG ACGAGCGCGG CCGCGTCAAG ACCGATGGAC ACCTGCGCAC CAATGTGCCC GGCATCTACG CCATCGGCGA CGTAATCACT GGTCCCATGC TCGCCCACAA GGCGGAGGAC GAGGGTGTTG CCGTAGCCGA GATCATCGCG GGCCAAGCGG GCCACGTGAA TTATGATGTC ATCCCGTCCG TCGTCTACAC GAGTCCCGAA GTCGCCTCGG TCGGCAAGAC CGAGGAGGAG CTTAAGAAGG CCGGGATCGA ATACAATGCC GGCAAGTTTC CTTTCAGCGC CAACGGCCGT GCCCGCTCGA TGCTGCACAC GGACGGTTTC GTGAAGGTGC TTGCCGATAA GAAGACAGAC CGCGTGCTGG GCGTCCACAT CCTTGGCTTC GGCGCCGGAG AAATGATCCA CGAAGCAGCG GTGTTGATGG AATTTGGCGG CTCCTCCGAG GATCTCGCGC GCACCTGCCA TGCGCACCCG ACCATGTCGG AAGCAGTGAA GGAAGCGGCT CTCGCCACGT TCTACAAGCC GATCCACTCC TGA
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Protein sequence | MPDTYDVVVI GTGPGGYVCA IKAAQLGLKT AVVEKRTNHG GTCVNVGCIP SKALLHATEM FAEAGHSFAD LGIDVGTPKL DLKKMLAHKE KTVDQNVKGL DFLFKKNKID VFRGAGRIAA AGKVVVTGED GKEQTVETKN IVIATGSDVA GIPGVDVDFD ERVIVSSTGA LELPAVPARM VVVGGGVIGL ELGSVWSRLG AKVTVIEYLD TILGGMDGEV AKQFQRMLAK QGFGFKLGAK VTGIAKTEGG ASVTFEPAKG GEAETIDADV VLVATGRKPY IDGLGLKEAG VEVDERGRVK TDGHLRTNVP GIYAIGDVIT GPMLAHKAED EGVAVAEIIA GQAGHVNYDV IPSVVYTSPE VASVGKTEEE LKKAGIEYNA GKFPFSANGR ARSMLHTDGF VKVLADKKTD RVLGVHILGF GAGEMIHEAA VLMEFGGSSE DLARTCHAHP TMSEAVKEAA LATFYKPIHS
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