| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3387 |
|---|
| Symbol | |
|---|
| ID | 4183163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3660318 |
|---|
| End bp | 3662012 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069281 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_675923 |
|---|
| Protein GI | 110635715 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.084852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCC GAGTTCACGA ACCAGGTTTT CTCCATCTTT TCACGCCGAA GCTCTTCACG
GTTCTGAGGG AAGGCTACGG ACGTGCCTCT CTCAAGGCCG ATGCTGTGGC TGGGCTCACC
GTCGCTATCA TCGCGTTGCC GCTTTCCATG GCGATCGCCA TCGCCTCCGG CGTCGCGCCA
GAGCGCGGCC TTTACACCTC CATCATTGGC GGCTTCTTCG TTTCTGCACT TGGCGGTAGC
CGATTCCAGA TCGGGGGGCC CGCCGGCGCG TTCATCGTGC TGGTGCTCGC CACGGTGCAC
ATGCATGGGG TGGACGGGCT CATCCTCGCC ACGTTCCTCT CGGGGTTCGT CCTGCTTGCG
ATTGGCCTGC TGCGATTGGG CACTTTCATC AAATACGTGC CCTACCCCGT CACGGTGGGC
TTCACCTCCG GCATCGCCCT CATCATTTTG ACGAGCCAGC TCAAGGACTT TCTTGGGCTG
GAACTCCATG AGCAGGAGCC CGGCCCCTTT ATCCCGAAGC TGCAAGCGCT CGGCACGGCA
CTGCCGACGC TCAACCCGCC CGCCGTGAGC ATTGCCCTTC TCGCGGTTGC AATCATCCTC
GTGCTACGGC GTTACCGTCC GCACTGGCCG GGATTCCTGA TCGCGGTGGC GCTCACGACC
CTCTTCGCTT GGCTCCTTTC ACTGCCGGTG GAAACAATCG GCACGCGCTT CGGCGGCATC
CCGCAGACAC TTCCCACACC GCTACTGCCG GACCTGTCGC TGGCAAAAAT TATCTCAGTT
CTCCCCGCCG CTCTCTCCTT CGCGCTGCTG GGCGGAATCG AAAGCCTGCT CTCGGCCGTA
GTCGCGGATT CCATGAGCGG GCGGCGGCAC CGCTCCAACG CTGAACTGGT TGCTCAGGGA
GCGGCGAACA TAGCCTCTTC GCTTTTCGGC GGCTTCTGCG TGACGGGCAC GATTGCCCGG
ACCGCTGCCA ATGTGCGGGC CGGCGCGCGA GGGCCTGTCG CAGGCATGCT GCACTCGGTT
TTCCTTCTTG CCTTCATGCT GGTGGCAGCG CCGCTCGCGC GCTTCATTCC GCTTTCGGCA
CTCGCGGCCA TTCTCGTGGT CGTGGCCTGG AATATGGCTG AAAAACATCA GTTTGCTGCC
CTCATCAGGA GCTCGTGGGC TGATGCGGTG GTGTTGATAG CGACCTTCCT CCTGGTGGTT
TTCCGCGATC TTACCGAGGG CATTCTCATC GGCGTCGGCC TGAGCGCGCT CTTTTTCCTG
AACCGTATTT CAAAGGAGAT CAAAGTCGAC CGCGTCCATG GGGCCGTCGA TTCCAGTAAG
CTCGATCAGG CCCTCAACGA AGAGTCTTAC TCGACCTCAC TCAGGACCGA CGACAACATT
TTGGTCTACC GCATCTCGGG CGCCTTCTTC TTCGGTGCAG CGGCGAGCGT GGCCGCAGCG
CTCGACCGTA TAGGCGGACA GCCCAAAGCC TATGTCATCG ACATCTCCGC GGTCGAAGTG
CTCGATTCCA CCGCTGCCGC CACGATGGAG GGATTTGTCC GCAAAGCCGG CTGGCAGGGA
GCGAAAGTTT ATCTCGTCGG CGCCAGAACA CACGTGCGCC ACCTGCTGCA CAAGCATGGA
CTGCATGCAC CACAGGTGCG GTTCTATCGC AAGCTCGATA CGGCGGTGGC GGCCGCGAGT
AAACTACAGG AGTAA
|
|---|
| Protein sequence | MLARVHEPGF LHLFTPKLFT VLREGYGRAS LKADAVAGLT VAIIALPLSM AIAIASGVAP
ERGLYTSIIG GFFVSALGGS RFQIGGPAGA FIVLVLATVH MHGVDGLILA TFLSGFVLLA
IGLLRLGTFI KYVPYPVTVG FTSGIALIIL TSQLKDFLGL ELHEQEPGPF IPKLQALGTA
LPTLNPPAVS IALLAVAIIL VLRRYRPHWP GFLIAVALTT LFAWLLSLPV ETIGTRFGGI
PQTLPTPLLP DLSLAKIISV LPAALSFALL GGIESLLSAV VADSMSGRRH RSNAELVAQG
AANIASSLFG GFCVTGTIAR TAANVRAGAR GPVAGMLHSV FLLAFMLVAA PLARFIPLSA
LAAILVVVAW NMAEKHQFAA LIRSSWADAV VLIATFLLVV FRDLTEGILI GVGLSALFFL
NRISKEIKVD RVHGAVDSSK LDQALNEESY STSLRTDDNI LVYRISGAFF FGAAASVAAA
LDRIGGQPKA YVIDISAVEV LDSTAAATME GFVRKAGWQG AKVYLVGART HVRHLLHKHG
LHAPQVRFYR KLDTAVAAAS KLQE
|
|---|
| |