Gene Meso_3219 details

Gene Information

• Locus tag: Meso_3219
• Symbol: atpC
• ID: 4180036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 3489826
• End bp: 3490233
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638069112
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_675756
• Protein GI: 110635548
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.816212
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA CCTTCACATT CGAGCTCGTT TCTCCCGAGA GGCTTCTTCT TTCAGAGGAA 
GTGGAGCAGG TCGTCATCCC CGGAACGGAA GGGGAAATGA CGGTCATGGC GGAACACGCG 
CCGGTCATGA CCGGCATAAA GCCCGGCGTC ATCACGGTCG TTAGGGCCGG GTCGGAGCGA 
GAGCAGTTCG TTGTCTTCGG CGGCTTCGCG GACATCACAC CGGACGGTTG CCGGTTGCTT 
GCCGAATCCG CCACGCGGGT AAAGGAACTC GACCGCGCGG ACCTTGCCCG ACGCATCGAG 
GAGGTTCGGG CGGAGGTGCA GGGCGCGAGA GACCACGAGA CCCGTACAAA GGCCGAGGAA 
TTTCTGGGTC AGCTCACCAC GCTGGAAGGC GCTCTTCTGC CTGCCTGA 

 

Protein sequence

MAKTFTFELV SPERLLLSEE VEQVVIPGTE GEMTVMAEHA PVMTGIKPGV ITVVRAGSER 
EQFVVFGGFA DITPDGCRLL AESATRVKEL DRADLARRIE EVRAEVQGAR DHETRTKAEE 
FLGQLTTLEG ALLPA