Gene Meso_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3208 
Symbol 
ID4182752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3476428 
End bp3477105 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID638069101 
Producthypothetical protein 
Protein accessionYP_675745 
Protein GI110635537 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.491657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGG CCGCTCAAAA CTTATCTAAG GTCAGGGACC GGATGGTCCA AGCCGTCCGC 
GAGGCGGGCC GTGCGTCCAA AGACGTCGCT CTCGTCGCCG TCTCGAAAAC CTTTGCGGCC
GACGAAATCC TTCCCGTGAT CGAGGCGGGC CAGCGGGTCT TCGGCGAAAA CCGCGTGCAG
GAAGCGCAGG GCAAATGGCC GGGGCTCAAG GAAGCCTTTC CCGATATAGA ACTTCATCTG
ATCGGGCCGC TCCAGTCCAA CAAGGCGAAG GAGGCAGTGG CGCTTTTCGA CGTGATCGAG
ACAGTGGACC GGGAAAAGAT CGCCGCCGCG CTCGCTGCCG AGATGGAAAA GCAGGGCCGC
CGCCTTCGGC TCTATGTCCA GGTCAATACG GGTCTCGAAC CACAGAAAGC GGGCATCGAC
CCGCGCGAGA CCGCAGCCTT TGTGGCGCGT TGCCGCGAAG TCCATGGGCT TGAGATCGAG
GGGCTGATGT GCATCCCGCC CCTGGACGAA AACCCCGGTC CTCATTTCGC TCTGCTCGAG
AAGCTGGCGC GCGAGGCCGG CGTGGAGAAA CTCTCGATGG GCATGTCCGG GGACTTTGAG
ACCGCTATCG CCTTCGGGGC GACCAGCATT CGCGTGGGCT CGGCGATCTT CGGCAGCCGG
GCTTATTCCG CGGGTTGA
 
Protein sequence
MNEAAQNLSK VRDRMVQAVR EAGRASKDVA LVAVSKTFAA DEILPVIEAG QRVFGENRVQ 
EAQGKWPGLK EAFPDIELHL IGPLQSNKAK EAVALFDVIE TVDREKIAAA LAAEMEKQGR
RLRLYVQVNT GLEPQKAGID PRETAAFVAR CREVHGLEIE GLMCIPPLDE NPGPHFALLE
KLAREAGVEK LSMGMSGDFE TAIAFGATSI RVGSAIFGSR AYSAG