| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3162 |
|---|
| Symbol | |
|---|
| ID | 4181822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3432182 |
|---|
| End bp | 3433354 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638069055 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_675699 |
|---|
| Protein GI | 110635491 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC TCGCGAAACC GGACCAGCGT CCGGCAAATC CCAATTTTTC TTCAGGACCC
TGCGCAAAAC GCCCCGGCTG GACGCCCGAG GCGCTGAAAG GCGCTGCCCT CGGCCGCTCT
CATCGAGCCA AGATCGGCAA GGAAAAGCTC TCCCGCGCCA TCGAACTCAC CCGTGAGGTG
CTGCAGGTTC CCGCCGATTA CCGCATCGGC ATCGTTCCGG CCTCCGACAC GGGTGCCGTC
GAGATGGCGC TATGGTCGCT GCTCGGCGAG CGCGGTGTCG ATATGCTCGC CTGGGAATCC
TTCGGGGCGG GTTGGGTGAC GGATGTCGTC AAGCAGCTCA AGCTCAAGGA CGTGCGGCGT
CTCGAGGCCG ACTACGGCAA GCTGCCCGAT CTTTCCCAGG TCGATTTCGA TCGCGACGTG
GTCTTCACCT GGAACGGCAC GACATCGGGC GTGCGCGTGC CAAACGCGGA CTTTATCCCG
GCCAACCGCA AGGGGCTGAC CATCTGCGAT GCCACCTCGG CGGCCTTCGC CCAGCGTCTC
GATTTCTCCA AGTTGGACGT CGTCACCTTC TCCTGGCAAA AAGTGCTCGG CGGTGAAGGC
GCACATGGCA TTTTGATCCT ATCCCCGCGT GCGGTGGAGC GGCTGGAAAC CTATGTGCCG
GCCTGGCCGC TGCCGAAGAT TTTCCGCCTC ACCAAGGGCG GCAAGCTGAT CGAGGGCATC
TTCAAGGGCG AGACCATCAA CACGCCCTCC ATGCTCTGCG TGGAAGACTA TCTCGATGCG
CTCGAATGGG CGAAGTCGGT GGGCGGTCTT GAAGGACTGA TCGGCCGCGC CGACGCCAAT
TTTGCCGTCA TCGACCGTTT CGTGAACGAG AGCGGCTGGC TTGCGCATCT CGGCGAAGAT
CCGGCCACGC GATCCAACAC ATCGGTCTGC CTCAGCATTG TCGACCCCGC GGTTGCGGCG
CTGGACGAAG AGGCTCGGGC GGCATTCGCC AAGGGCATCG TCTCCCGGCT CGACAACGAA
GGCGTCGCCT ACGACATCGG CCATTACCGT GATGCGCCTT CGGGCCTCAG GATCTGGGCC
GGCGCTACGG TGGAGACTTC CGATCTCGAA GCGCTCATGC CTTGGCTCGA CTGGGCCTTT
CAAGAGCAAA AAACCGCGCT CCAGGCAGCC TGA
|
|---|
| Protein sequence | MTMLAKPDQR PANPNFSSGP CAKRPGWTPE ALKGAALGRS HRAKIGKEKL SRAIELTREV
LQVPADYRIG IVPASDTGAV EMALWSLLGE RGVDMLAWES FGAGWVTDVV KQLKLKDVRR
LEADYGKLPD LSQVDFDRDV VFTWNGTTSG VRVPNADFIP ANRKGLTICD ATSAAFAQRL
DFSKLDVVTF SWQKVLGGEG AHGILILSPR AVERLETYVP AWPLPKIFRL TKGGKLIEGI
FKGETINTPS MLCVEDYLDA LEWAKSVGGL EGLIGRADAN FAVIDRFVNE SGWLAHLGED
PATRSNTSVC LSIVDPAVAA LDEEARAAFA KGIVSRLDNE GVAYDIGHYR DAPSGLRIWA
GATVETSDLE ALMPWLDWAF QEQKTALQAA
|
|---|
| |