Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3147 |
Symbol | |
ID | 4183100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3416680 |
End bp | 3417423 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638069040 |
Product | ABC transporter related |
Protein accession | YP_675684 |
Protein GI | 110635476 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.383516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCATGA TCGAAATCAG GAATATCTCT AAATCCTATG GCACGTTCCA GGTCTTCGAC GGATTGAGCC TTGAGGTCGA GGAGCACCAG GTCGTTTGTC TCATCGGTGC GTCGGGTTGC GGGAAGTCCA CGCTGCTGCG CTGCTTGAAC GGACTTGAAT CCATCGATAG CGGAGAAATC CGCATACATG GTGACCGCGT GACCGGTCCG GGCGTGGACG TCAACGCCTT ACGCCGCGAT GTCGGCATCG TCTTCCAGAG CTATAATCTC TTCCCGCACA TGACCGTGCT GGAAAACGTC ACCCTTGCGC CCTGCAAGGT GCTTGGCAAG CCTAAGGCCG AGGCTACAGC ACTCGCAATG CCGCTTCTCG AGCGCATAGG CCTGGCGCAC AAGGCGAATG AATATCCGGA CAGGCTCTCG GGCGGCCAGC AGCAGCGCGT TGCTATCGTC CGCGCGCTTG CCATGAATCC GATGATCCTG CTGCTCGATG AGATCACATC GGCACTGGAC CCCGAATTGG TCGCTGAAGT GCTCAACATT GTACGTGACC TTGCCGCTGA TGGCATGACC ATGCTCCTCG CCACCCACGA AATGGGTTTC GCGCGCGAGG TTTCGAGCAA GGTCTGCTTC CTTGCCGGCG GAAAGGTGCA CGAGGAAGGC CCGCCCGAGC AGATTTTCGG AGCCCCGACG CAAGAGCGCA CCGCAGCTTT TCTCCAGCGA ATCGTTGAGG CTGGGCGGCT TTAG
|
Protein sequence | MAMIEIRNIS KSYGTFQVFD GLSLEVEEHQ VVCLIGASGC GKSTLLRCLN GLESIDSGEI RIHGDRVTGP GVDVNALRRD VGIVFQSYNL FPHMTVLENV TLAPCKVLGK PKAEATALAM PLLERIGLAH KANEYPDRLS GGQQQRVAIV RALAMNPMIL LLDEITSALD PELVAEVLNI VRDLAADGMT MLLATHEMGF AREVSSKVCF LAGGKVHEEG PPEQIFGAPT QERTAAFLQR IVEAGRL
|
| |