Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3131 |
Symbol | |
ID | 4183201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3397858 |
End bp | 3399384 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069023 |
Product | extracellular solute-binding protein |
Protein accession | YP_675668 |
Protein GI | 110635460 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.792469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC TGCTGCTCTC CACAACCGCA CTTTTGTTTG CCCTGGCGAT CGGGCCTGCC TTCGCCCAGG AGACCATCGT GGTCGGCACC GATGTCGACG CGGGCACTCT CGACTCGCGC CTGACGCGGG ACACGACGGC TTATCGTGTC GCCGACCTCA TATATTCCGG CCTGGTCCAC ATCACTCCGC AGCTCGAAGT CGTTCCCGAC CTTGCCGAAA GCTGGGAGAC GCCGGACCCG CAAACCTTCA TCTTCAAATT GCGCGACGGG CTTAAATTCT CCGACGGCAC GCCGCTTACC GCCGACGACG TGGTCTATAC TTACACGACG CTGCTCAATC CCGATTTCAA CGCGCCGATG CGCACCCTCT ACACACCCAT CCAATCGGTG GAGAAGGTCG ACGACCTGAC GGTGAAATTC AGCCTCGACG CGCCTTATGC GCCGCTGCTT TCCTATCTCG ACCTTGGAAT CGTGCCGCAG GAACTGGCGG AAGGCGGCCA TGATATCGCC ACCCAGCCGG TGGGCGCGGG CCCGATGAAG CTTACATCCT GGAACCGCGG TGCGGAAATC GCGCTCGAGG CAAACCCCGA ATATTGGGGT GGCGCTCCGC AAATCGAGAA AGTCACGCTT AAGATCATCC CGGACAACTC TGCCCGCGCG CAGGCCTTCG AGGCGGGAGA TCTCGACGTG ATCCAATCGC CGCTCTCGCC ACAGGACATA TCGCGTCTTG CCGGGGACGA TCGCTTCGGC AATGCGATCA TGCCGGGCCT CGGTGTCACC TACATCAATT TCAACACCAA GGACCCGCTG CTTTCGGACC CGAAGATGCG GCAGGCCTTC TCCATGCTGG TGGACCAGCA GACGATCGTC AGCGACATCT ATCAGGACGT GGACAAGGTT GCATCGTCCG TGCTCCTGCC CTCTTCTTGG GCCTATTCGC CCGATATCAA GCAGCCGACC TTCAATATCG AAGGCGCCGT GGCCCTTTTC AATGAGCTCG GCTGGACCGA CAGCAACGGC GACGGCATCC TGGACAAGGA TGGCAACAAA CTGACGGTCA CCCTCGCCAC GCATAGCGAG GACCCGAACC GCGTTCAGAC GATCGAGTTT CTGCAGACCA TGTTCAGCCA GGCCGGCGTG GATGCCAAAA CGCAGATCAC GGACTGGCCG AGCTTTTCGA CAAACTATGT GCAGAAATCC CAGCACCAGA TCGCCCTGCT GGGATGGCTG AACATCGTCG ACCCCGACAG GCTGCTCTTC TCGCAGCTTA CGACCGGCGG CTCCACCAAT TGGGGCGGCT ACTCCAATCC GAAGGTCGAT GAGCTCCTGC AAAAGGGCCG CTCCTCGCTC GATCAGCAGG AGCGCGCGGC AGCCTACCAG GAAGCGGCGA AAATCCTCGC CGAAGAGCTT CCCTACTTCA TCGTGTCGTA TCAGGGTTAC CAGCTCTTCT ACGACAAGGA GCTTCCGACC GAGGTGACAG CGACGCCGCG CGGCTATCTC CGCGGGCTTA TCGGGATGGA AAATTGA
|
Protein sequence | MKKLLLSTTA LLFALAIGPA FAQETIVVGT DVDAGTLDSR LTRDTTAYRV ADLIYSGLVH ITPQLEVVPD LAESWETPDP QTFIFKLRDG LKFSDGTPLT ADDVVYTYTT LLNPDFNAPM RTLYTPIQSV EKVDDLTVKF SLDAPYAPLL SYLDLGIVPQ ELAEGGHDIA TQPVGAGPMK LTSWNRGAEI ALEANPEYWG GAPQIEKVTL KIIPDNSARA QAFEAGDLDV IQSPLSPQDI SRLAGDDRFG NAIMPGLGVT YINFNTKDPL LSDPKMRQAF SMLVDQQTIV SDIYQDVDKV ASSVLLPSSW AYSPDIKQPT FNIEGAVALF NELGWTDSNG DGILDKDGNK LTVTLATHSE DPNRVQTIEF LQTMFSQAGV DAKTQITDWP SFSTNYVQKS QHQIALLGWL NIVDPDRLLF SQLTTGGSTN WGGYSNPKVD ELLQKGRSSL DQQERAAAYQ EAAKILAEEL PYFIVSYQGY QLFYDKELPT EVTATPRGYL RGLIGMEN
|
| |