Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3107 |
Symbol | |
ID | 4183255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3376830 |
End bp | 3377381 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638068999 |
Product | RNA polymerase sigma factor |
Protein accession | YP_675644 |
Protein GI | 110635436 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCGT CACCAAGTTT CCGCGACGGT CTCTTGGCCG CAGTGCCAAC GCTGCGCGCT TTTGCAGTAT CGCTCGCAAA AAATGCTGAC CGGGCCGATG ATTTGGTCCA GGAAACGCTG GTTAAAGCCT GGGACAAGCA GGACAGCTTC CAACCAGGCA CCAATCTCAA GGCTTGGCTC TTCACCATCC TTCGCAACGA GTTTTATTCC CAAATGCGCA AGCGTCGGCG CGAGGTTGAA GATAGCGACG GAAGCATCAC CGCGCGCTTG TCTATCCATC CCGCCCAAGA GGGCAATTCG GACCTGAACG ATTTTCGCCG CGCGCTTGCT CTCCTGCCCG AAGATCAGAG GGAGGCCATT ATACTGATCG GGGCCTCCGG GTTTTCCTAT GAGGAGGCCG CCGAGATCTG CGGATGCGCG GTAGGCACGA TCAAATCCCG TGTCAGCCGG GCGCGCAGTC GACTGCAGGA GATCCTGTCA ATCTCGGGGG AAGGTGATTT CGGGCCCGAT GCGATTACGG CGCAGGTGAC CAACTCAGCG GCAGTGGCTT AG
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Protein sequence | MSASPSFRDG LLAAVPTLRA FAVSLAKNAD RADDLVQETL VKAWDKQDSF QPGTNLKAWL FTILRNEFYS QMRKRRREVE DSDGSITARL SIHPAQEGNS DLNDFRRALA LLPEDQREAI ILIGASGFSY EEAAEICGCA VGTIKSRVSR ARSRLQEILS ISGEGDFGPD AITAQVTNSA AVA
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