Gene Meso_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3083 
Symbol 
ID4183270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3354615 
End bp3355553 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content59% 
IMG OID638068975 
Producthomoserine O-succinyltransferase 
Protein accessionYP_675620 
Protein GI110635412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA AGATTCCCGA TCAGCTGCCT GCCCGCGAGG TGCTTGTGCG CGAGGGCGTC 
TCCGTCATGG ATGAAAAGAC GGCGCTGCGT CAGGACATTC GTCCGCTGCA GATCGGGCTC
TTGAATCTCA TGCCGAACAA GATCCGCACC GAGACGCAGT TCGCCCGCCT GATCGGGGCC
AGCCCGCTCC AGGTGGAACT GACGCTGGTG CGCATCGGCA ACCACAAAGC CAAGAACACG
CCGGAAGATC ACCTCATCAC CTTCTACGAA ACCTGGGAAG AGGTGGCGCC GCGCAAGTTC
GACGGCTTTA TCGTGACGGG TGCTCCCATC GAGCTTTTGC CTTACGAGGA CGTCACCTAT
TGGAACGAAA TGACGCGCAT TCTCGATTGG ACCACTTCCC ACGTCCACTC CTCGTTTTTC
ATCTGCTGGG GCGCGATGGC CGCGGCCTGG CATTTCCACG GCATTCCGAA GCATACGTTG
GATAAAAAGG CGTTTGGGGT GTTCCGGCAC CGCAACAATG CTCCCGCCTC TCCCTATCTC
GCCGGGTTCT CGGACGATTT GGCGCTTCCA GTCTCGCGCT GGACGGAGGT GCGCACTGCC
GATATTCCCG CTAATTCCGG CTTGGAAATG CTCATGGATT CGGACGAAAC CGGCCCATGC
CTGCTCGCGG AAGCCGCCGG GAACCGGCTC TATATGTTCA ATCACATCGA GTATGATTCC
ACATCGCTCA AGGAGGAGTA TGACCGGGAC GTGGCCGCCG GTGTGCCGAT CGAGGTGCCA
CATGAATATT ACCCGGGCAA TGATCCGACG CGGCCGCCGC TCAATCGCTG GCGCTCACAC
GCACATCTGC TCTTCGGCAA CTGGATCAAC CAGGTGTATC AGACCACGCC TTACGATCTG
GACAAGATCG GCAGGAACTT GGAGCATGCC CTTTCCTGA
 
Protein sequence
MPIKIPDQLP AREVLVREGV SVMDEKTALR QDIRPLQIGL LNLMPNKIRT ETQFARLIGA 
SPLQVELTLV RIGNHKAKNT PEDHLITFYE TWEEVAPRKF DGFIVTGAPI ELLPYEDVTY
WNEMTRILDW TTSHVHSSFF ICWGAMAAAW HFHGIPKHTL DKKAFGVFRH RNNAPASPYL
AGFSDDLALP VSRWTEVRTA DIPANSGLEM LMDSDETGPC LLAEAAGNRL YMFNHIEYDS
TSLKEEYDRD VAAGVPIEVP HEYYPGNDPT RPPLNRWRSH AHLLFGNWIN QVYQTTPYDL
DKIGRNLEHA LS