Gene Meso_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3082 
Symbol 
ID4183269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3353529 
End bp3354593 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content63% 
IMG OID638068974 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_675619 
Protein GI110635411 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.926981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCGTG ACCGACGGAT TCTCGACCTT TTTCATATCG AGGTGCCGGT GCTGCTGGCC 
CCTATGGCCG GCTCCGGCGG CTCGGAACTC GCAATAGCCG TTGCTGAAGC GGGCGGGCTG
GGGTCGCTTC CCTGCGCGAT GCTATCGCCG GAGCAGATCC GAACCGAACT CGGCATCATC
CGGCAGCGGG TGAGCAAGCC CATAAACCTC AATTTTTTCT GCCATAAGCC GCCTCATCGC
GACCCAATGC GGGAGGCTGG CTGGCGTAAG CGGCTTGAAC CCTATTATGC CGAATTCAAG
CTTGATCCCA CTCCCGCAGC GGCGAATGCC GGCCGCAATC CCTTTGACGA GGAAAGCTGT
AAAATCGTCG AGGAATTTCG GCCGGAGATC GTCAGCTTCC ATTTCGGCCT GCCGCAAGAG
CCGCTGCTTG AGCGCGTGCG CAACACCGGC GCCAGAATAA TCGCCTCCGC CACGACAGTT
GCGGAAGCGC GATGGCTGGA TGAGCGCGGC TGCCATGCCA TTATTGCTCA AGGCGCCGAA
GCGGGGGGAC ATCGGGGCAT ATTCCTGGAG GACGATATCA ACACGCAGCC CGGCACAATG
GCGCTCGTGC CTCAGGTGGT GGATGCCGTT TCGGTACCGG TCATCGCCGC GGGCGGCATC
GCGGACGGCC GCGGCATTGC CGCCGCCTTC ATGCTGGGTG CATCAGCCGT TCAAATCGGC
ACAGCCTATC TTCAAACCCC GGAAGCCTTG AGCGGCCCTC TCCACCGCCA GGCATTGGCT
GAAGCACGGG AAGACCGCAC CGTGCTGACA AACGTCTTCA CCGGCCGCCC CGCGCGCGGA
TTGATCAACC GGATCGTCCG CGAGGTGGGG CCGATCAGCG CCGAAGCGCC AGCCTTCCCC
CTTGCCTTGG CTGCCGTCGG ACCGCTCCGC AAAGCTGCAG AAGAAGCAGG AACAGGCGAC
TTCTCGCCAC TGTGGGCCGG CCAGGCCGCG CCACTTGCAA GGGCAATGCC CGCAGGCGAA
CTCACGCTGA AGCTCGCAAA AGATGCAGCG GCGCTTCTAG GGTGA
 
Protein sequence
MWRDRRILDL FHIEVPVLLA PMAGSGGSEL AIAVAEAGGL GSLPCAMLSP EQIRTELGII 
RQRVSKPINL NFFCHKPPHR DPMREAGWRK RLEPYYAEFK LDPTPAAANA GRNPFDEESC
KIVEEFRPEI VSFHFGLPQE PLLERVRNTG ARIIASATTV AEARWLDERG CHAIIAQGAE
AGGHRGIFLE DDINTQPGTM ALVPQVVDAV SVPVIAAGGI ADGRGIAAAF MLGASAVQIG
TAYLQTPEAL SGPLHRQALA EAREDRTVLT NVFTGRPARG LINRIVREVG PISAEAPAFP
LALAAVGPLR KAAEEAGTGD FSPLWAGQAA PLARAMPAGE LTLKLAKDAA ALLG