Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2999 |
Symbol | prfA |
ID | 4182414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3266782 |
End bp | 3267861 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638068889 |
Product | peptide chain release factor 1 |
Protein accession | YP_675536 |
Protein GI | 110635328 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.381466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGC TGCCGCGCGA ACGGATGGAC CAGGTTTTGA AGCGTTTCGA GCTGATCGAA ACGCAGATGG CGGCCGGCCC TTCGCCGGAT GCTTATGTGA AGCTCGCCTC CGAATATTCA GAGCTGCAGG AGGTGGCGAA CAGTATCCGC GCGCTTCGGA AGGCGGAGGC GGAACTGGAA GACCTCGATA CGATGCTGGC GGACAAGAGC ATCGACCGCG AGATACGCGA GCTTGCGGAA ATCGACCGGG AAGAGGTGGA AAGCCGCGTT GAAGACATGC AGCAGAAACT TCAAGTTCTG CTGCTCCCGA AAGACGAGGC GGATGAGAAA AACGCCATCC TGGAGATTCG CGCCGGGACG GGCGGCGACG AGGCGGCACT GTTTGCCGGC GATCTTTTCC GGATGTACGA ACGCTACGCT AGCGAGCGTG GCTGGCGCGT TGAGGTGGTT TCGGCCAGCG AAGGCGAGGC CGGTGGCTAC AAGGAGATTA TCGCTTCGGT AACAGGGCGC GGGGTCTTTT CACGGCTAAA ATTCGAGTCG GGCGTGCATC GCGTGCAGCG CGTTCCGGCC ACGGAAGCGC AGGGGCGCAT CCACACCTCC GCCGCCACAG TGGCGGTGCT GCCCGAGGCG GAAGACATCG ACGTGGATAT CAAACCCGAG GATATCCGCA TCGATACGAT GCGGGCTTCA GGCGCAGGCG GCCAGCACGT GAACACGACC GACTCGGCCG TGCGCATCAC GCATTTGCCG ACCGGCATCA TGGTCGTTTC CGCGGAAAAG TCGCAGCATC AGAACCGGGC GCGGGCGATG CAGATCCTGC GCGCGCGCCT GTTCGACATG GAGCGCTCGC GCGCGGCCAA CGAGCGCTCG GAGGCGCGAC GGCTGCAGGT TGGCACCGGC GACCGTTCGG AGCGCATCCG CACCTACAAT TTCCCCCAGG GGCGTGTGAC AGATCATCGA ATCAATCTCA CACTCTACAA GCTCGACCGT GTGATGGAGG GCGAGCTCGA TGAAGTCATC GATGCGCTGA TCGCCGATCA CCAGTCGAAA CTGCTGGCGG CGGAGGGAGC GGAGAGCTGA
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Protein sequence | MAELPRERMD QVLKRFELIE TQMAAGPSPD AYVKLASEYS ELQEVANSIR ALRKAEAELE DLDTMLADKS IDREIRELAE IDREEVESRV EDMQQKLQVL LLPKDEADEK NAILEIRAGT GGDEAALFAG DLFRMYERYA SERGWRVEVV SASEGEAGGY KEIIASVTGR GVFSRLKFES GVHRVQRVPA TEAQGRIHTS AATVAVLPEA EDIDVDIKPE DIRIDTMRAS GAGGQHVNTT DSAVRITHLP TGIMVVSAEK SQHQNRARAM QILRARLFDM ERSRAANERS EARRLQVGTG DRSERIRTYN FPQGRVTDHR INLTLYKLDR VMEGELDEVI DALIADHQSK LLAAEGAES
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