Gene Meso_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2999 
SymbolprfA 
ID4182414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3266782 
End bp3267861 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID638068889 
Productpeptide chain release factor 1 
Protein accessionYP_675536 
Protein GI110635328 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.381466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC TGCCGCGCGA ACGGATGGAC CAGGTTTTGA AGCGTTTCGA GCTGATCGAA 
ACGCAGATGG CGGCCGGCCC TTCGCCGGAT GCTTATGTGA AGCTCGCCTC CGAATATTCA
GAGCTGCAGG AGGTGGCGAA CAGTATCCGC GCGCTTCGGA AGGCGGAGGC GGAACTGGAA
GACCTCGATA CGATGCTGGC GGACAAGAGC ATCGACCGCG AGATACGCGA GCTTGCGGAA
ATCGACCGGG AAGAGGTGGA AAGCCGCGTT GAAGACATGC AGCAGAAACT TCAAGTTCTG
CTGCTCCCGA AAGACGAGGC GGATGAGAAA AACGCCATCC TGGAGATTCG CGCCGGGACG
GGCGGCGACG AGGCGGCACT GTTTGCCGGC GATCTTTTCC GGATGTACGA ACGCTACGCT
AGCGAGCGTG GCTGGCGCGT TGAGGTGGTT TCGGCCAGCG AAGGCGAGGC CGGTGGCTAC
AAGGAGATTA TCGCTTCGGT AACAGGGCGC GGGGTCTTTT CACGGCTAAA ATTCGAGTCG
GGCGTGCATC GCGTGCAGCG CGTTCCGGCC ACGGAAGCGC AGGGGCGCAT CCACACCTCC
GCCGCCACAG TGGCGGTGCT GCCCGAGGCG GAAGACATCG ACGTGGATAT CAAACCCGAG
GATATCCGCA TCGATACGAT GCGGGCTTCA GGCGCAGGCG GCCAGCACGT GAACACGACC
GACTCGGCCG TGCGCATCAC GCATTTGCCG ACCGGCATCA TGGTCGTTTC CGCGGAAAAG
TCGCAGCATC AGAACCGGGC GCGGGCGATG CAGATCCTGC GCGCGCGCCT GTTCGACATG
GAGCGCTCGC GCGCGGCCAA CGAGCGCTCG GAGGCGCGAC GGCTGCAGGT TGGCACCGGC
GACCGTTCGG AGCGCATCCG CACCTACAAT TTCCCCCAGG GGCGTGTGAC AGATCATCGA
ATCAATCTCA CACTCTACAA GCTCGACCGT GTGATGGAGG GCGAGCTCGA TGAAGTCATC
GATGCGCTGA TCGCCGATCA CCAGTCGAAA CTGCTGGCGG CGGAGGGAGC GGAGAGCTGA
 
Protein sequence
MAELPRERMD QVLKRFELIE TQMAAGPSPD AYVKLASEYS ELQEVANSIR ALRKAEAELE 
DLDTMLADKS IDREIRELAE IDREEVESRV EDMQQKLQVL LLPKDEADEK NAILEIRAGT
GGDEAALFAG DLFRMYERYA SERGWRVEVV SASEGEAGGY KEIIASVTGR GVFSRLKFES
GVHRVQRVPA TEAQGRIHTS AATVAVLPEA EDIDVDIKPE DIRIDTMRAS GAGGQHVNTT
DSAVRITHLP TGIMVVSAEK SQHQNRARAM QILRARLFDM ERSRAANERS EARRLQVGTG
DRSERIRTYN FPQGRVTDHR INLTLYKLDR VMEGELDEVI DALIADHQSK LLAAEGAES