| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2956 |
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| Symbol | |
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| ID | 4181850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3216765 |
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| End bp | 3218135 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638068840 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_675493 |
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| Protein GI | 110635285 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG CCGTCAACTT GGGGGTTGGC GTCCGCCAAT CGCTGACGAT CAGCCGGGAG
ATGGTCCAGG CTGTTGAGAT ATTGCAATAT GACCGTGAAG AGCTGGCAGC ATTCTTGCGG
GAGCAAGTAG AAAAAAATCC CCTGCTGCGC ATGAAAGATC GTGCTGAAGC TGCTCCGGGA
CAAGGACTTG GCGAGCGCTG GAGGCGCGAC TCCGGCGACA GGGCCTTTGC GACCGGGGCG
GCAGGCGATG CTCCGGATAT AGCCTCCTCC ATTGGCGAAG AAGTCACGCT ATCCGCGCAC
CTCCACCTTC AGCTTGCCTT GGTAAAGTGC ACGCCAGAAG TGCGGGTCCG CGCCGGTCAA
GTGATCGACT CGCTTGAGGA GGACGGATAT CTGCGGCAGG ACCCGGTGAA GCTGGCCGAG
CTTCTCGGCT GCTCGCAAGA TGAGATGGAC GCGGCGATTG CTCTTGTGCA GACCTTCGAT
CCGGCCGGTG TCTGTGCGCG CAACCTTGCT GAATGTCTGC AGCTCCAGCT ACGGGAGCAG
GGGGAATTGC GCCCTGCAAT GGCTGCTTTG CTTACCCACA CCGATCTCAT CGTGAAGGGC
GAAGTCAAGC GCCTTGCAGC GATCTGCGGC GTGAGCGAAA GCGAGGTACG CGTAATGCTT
CGAAAGTTGC GTAGCCTTGA CCCAGCACCA GGACGCGCGC TGGATTGCAC TCCCGTCTGT
CCGGCCTTGC CGGACGTGTT GGTGGATTTG ACGCCAACCG GGGCACTCAA AGTAGAGCTC
AATCCGGATC TGATACCGAA GCTGCTGCTG GATCGGAGCT ATCATGCTGA GGTTTCCTCG
CAAATACGCG AGAAGGATGA GAAGAGCTAT CTCGACGAAT GCATGCGCAG CGGAGCTCTT
CTGATGCGGA ACCTCGATCG GCGCTTCACG ACCATGCTGC GGATCTGTCG CGAGATCGTA
CGCCGGCAGG AGGCATATTT CCGGCACGGC TTGTCCCATT TGCGGCCGCT GACTCAGGGC
GAGATCGCTC AGGAGCTGGG CATTCATGAA TCGACGGTCA GCCGTGCTAC GGCGAACAAA
TACATATTGT GCTCGCGTGG GCTCCTTCCT GTGAAATTTT TCTTTTCGGA GGCTTTGGGC
GGCACAGGAA CCGATGGCCT GGGCCATGCC TCCGAAACCA TTCGCCGGCG CATCCGCGAG
GTAGTGGACG GCGAAACGCC TGAAAAGATC CTATCCGATG ATGTGATTGC CGCGCTTTTG
CACGGTGAGG GGATCGATAT AGCGCGGCGA ACAGTCGCCA AATACCGCAG CCAGCTCAAA
ATACCCTCGT CAGCCGATCG GCGGAGACTT GCACGCCTGG AGTGTGCTTG A
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| Protein sequence | MNIAVNLGVG VRQSLTISRE MVQAVEILQY DREELAAFLR EQVEKNPLLR MKDRAEAAPG
QGLGERWRRD SGDRAFATGA AGDAPDIASS IGEEVTLSAH LHLQLALVKC TPEVRVRAGQ
VIDSLEEDGY LRQDPVKLAE LLGCSQDEMD AAIALVQTFD PAGVCARNLA ECLQLQLREQ
GELRPAMAAL LTHTDLIVKG EVKRLAAICG VSESEVRVML RKLRSLDPAP GRALDCTPVC
PALPDVLVDL TPTGALKVEL NPDLIPKLLL DRSYHAEVSS QIREKDEKSY LDECMRSGAL
LMRNLDRRFT TMLRICREIV RRQEAYFRHG LSHLRPLTQG EIAQELGIHE STVSRATANK
YILCSRGLLP VKFFFSEALG GTGTDGLGHA SETIRRRIRE VVDGETPEKI LSDDVIAALL
HGEGIDIARR TVAKYRSQLK IPSSADRRRL ARLECA
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