Gene Meso_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2913 
Symbol 
ID4180024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3166550 
End bp3167914 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content54% 
IMG OID638068798 
Productmajor facilitator transporter 
Protein accessionYP_675451 
Protein GI110635243 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAAG CCGCACGCAT AGATGCCGCT GCAGTCATCA ATGACAACAA TATTAGTCGG 
TTCCAGTACA GAATTTTCAT ATTAGCCACG TTGATCATGA TGTGCGACGG CTTTGATACC
CAAGCCGTAG CATATGTGGC GCCGAGCATC GTGGCCGAGT GGAATATGGC ACCGGGTTCA
TTTGGTCCAG TGTTTGCCGC GCTGTTGCTT GGCAGCATGG TGGGCGCGTT CGCGTTTGGC
TATTTGGCTG ACAAAATTGG ACGCAAATAC ACGCTGGCCG GATGCGTCGC GCTGTTTGGG
ATCCTGAACT TTGCGTCGGC ATACGCGACT TCCATTGAAA CATTCACTGT GCTGCGGTTT
CTGTGCGGAA TCGGGCTCGG CGGCACTGTT CCCAATGTGA CGTCGTTGGT TTCTGAGTAT
GCGCCGGCAA GAAAAAGGGC GACACTCGTC GCGATCACCT GGGCAGGTTT CGGGCTTGGC
GCCGTCGTTG GTGGATTGAT CAGCGTGCCA TTGATCTCAC ACTTTGGCTG GCCGGCCGTT
TTCATCGCCG GAGGGATTCT TCCGCTGCTG CTGCTGCCTT TCATATTTTT CTCAGTGCCG
GAATCGATCA AATTCTTGAT CCTGGCCGGA GGCAAAGGTG CGGCGGTTGC TTCGATTCTC
AAGCTGATCT GTCCTAGCGG CTCTTTCAAG GACAATGATG TTTTTGTTCT TGAAGAAAGC
CGGCCGGGAC GAGGGCAGAT TTCCGCCTTG TTCAAAGATG GACTGGCGAT AGGCAGCATT
TTCCTTTGCC TCGCCTTCTT CATGAGTCTT CTGCTGGTCT ATCTCTTCAT CAACTGGATA
CCGCTGCTTC TGCGCCAGGC AGGCCTTCCC CTTCAGCATG CAGTTATGGG AACGATAATT
TTCAACCTGG CTGGCATTAT CGGTAGTGTC TTTTGCACAC AGCTCATCGA CCGCAAGGTG
GCTCGGCCGG TATCGATCCT GATCGCCGCC TACTTTATCG GAGCCGCTGC CGTGTTCTCT
ATTGGGTATG CTGGAACAGC GTTTTGGCCG ATCATGATCA CAATCTTCCT GAGCGGCTTC
TTCATTATCG GAGTCCAGTT GTCGTTGAAC GCCTTCATCA CGAACTACTA TCCGACTTCA
ATCCGCGGTA CGGGGGTCGG CTGGTCGCAA GTTATTGGCC GGCTGGGTTC TCTTCTTGGT
CCGTTGATTG GGGGTGCACT GGTGTCGCAG GGTATGGCAC CGAGCCAACT GTTCCAGGTA
AGCGCCGTTG CACCGCTTCT TGCGTGCGTA TCTTTGTTGA TTTTCGCAAG GCTATCGAGG
GCGGATCCGA AGGGGCAGCC TGCAATATCT GATGCCGCCG CCTGA
 
Protein sequence
MLEAARIDAA AVINDNNISR FQYRIFILAT LIMMCDGFDT QAVAYVAPSI VAEWNMAPGS 
FGPVFAALLL GSMVGAFAFG YLADKIGRKY TLAGCVALFG ILNFASAYAT SIETFTVLRF
LCGIGLGGTV PNVTSLVSEY APARKRATLV AITWAGFGLG AVVGGLISVP LISHFGWPAV
FIAGGILPLL LLPFIFFSVP ESIKFLILAG GKGAAVASIL KLICPSGSFK DNDVFVLEES
RPGRGQISAL FKDGLAIGSI FLCLAFFMSL LLVYLFINWI PLLLRQAGLP LQHAVMGTII
FNLAGIIGSV FCTQLIDRKV ARPVSILIAA YFIGAAAVFS IGYAGTAFWP IMITIFLSGF
FIIGVQLSLN AFITNYYPTS IRGTGVGWSQ VIGRLGSLLG PLIGGALVSQ GMAPSQLFQV
SAVAPLLACV SLLIFARLSR ADPKGQPAIS DAAA