Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2820 |
Symbol | |
ID | 4179915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3069116 |
End bp | 3070426 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638068708 |
Product | xylose isomerase |
Protein accession | YP_675361 |
Protein GI | 110635153 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.489798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG GTTTTTTCGG CAACCTGCAG CCGATCTCTT ATGAAGGGCC GCAAAGCGAC AATCCCCTGG CCTTCCGCCA TTATAACCCC GACGAGGTCG TGCTCGGCAA GCGGCTTGAG GACCATTTGC GTTTCGCCGT CTGCTATTGG CACACCTTCG TCTGGCCCGG CGGCGATCCC TTCGGCGGAC AGACCTTCGA ACGCCCCTGG TTCGGCGATA CGATGGAGAG GGCAAGGCTC AAGGCGGATG TCGCATTCGA GCTGTTCGAA ATCCTCGGAG TTCCTTTTTT CACCTTCCAC GACGCCGATG TGCGCCCGGA AGGCGCCTCC TATTCCGAGA GCGTAGCCCG CCTGAACGAC ATCGCGGATT ATATCGCGGC CAAGATGGAG AAGACGGGCG TCAGGCTTCT TTGGGGCACG GCCAATCTCT TTTCCCACCG CCGCTTCATG GCGGGCGCCG CCACCAATCC CGATCCGGAT GTTTTCGCCT ACGCGGCCGC TACCGTGAAG GCCTGCATCG ACGTGACGAA GCGCCTCAAT GGCGAGAACT ATGTGCTCTG GGGCGGGCGA GAGGGCTACG AAACCCTGCT CAACACCGAC TTGGGCCGCG AACTGGATCA GCTCGGCCGC TTCCTCTCCA TGGTGGTGGA CTACAAGCAT CGAATTGGCT TCAAGGGCGC GATTCTCATC GAGCCAAAGC CGCAGGAACC CACCAAGCAC CAGTACGATT TTGACGTCGG CACGGTCTAC GGCTTCCTGA AGCGCTACGG GCTGGAAGAT GAGGTGAAGG TGAATATCGA GCAGGGCCAT GCGCTGCTCG CCGGCCATTC CTTCGAGCAT GAGCTTGCGC TTGCCGCCAC GCTCGGGATT TTCGGCTCCA TCGACATGAA CCGGAACGAC TATCAGTCCG GCTGGGATAC CGACCAGTTC CCCAACAATG CGCCGGAGGC GGCCCTGGCC TATTACTATA TTCTCCAGGC CGGGGGCTTC ACGACGGGAG GCACCAATTT CGATGCCAAG CTGCGTCGTC AGTCGCTAGA CCCGGAAGAC CTGGTCGCCG CCCATATCGG CGGCATGGAT ATCTGCGCCC AGGGGCTCAA GGCCGCCGCC CGTATGATCG AGGACAAAGC GCTGAGCGGA CCCCTTGAGG AGCGCTATTC GGGATGGAAC GCCACTGAGG CGCAGGCGAT GCTGAAGGGC GAGCGCTCGC TCGAAGCCAT CGCCGAGCGC GTGGCGCGTG AGAACCTTGA TCCGAAGCCG CGTTCGGGTC GCCAGGAGAA GCTTGAGAAT ATCATAAACC GCTACGTTTA G
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Protein sequence | MSTGFFGNLQ PISYEGPQSD NPLAFRHYNP DEVVLGKRLE DHLRFAVCYW HTFVWPGGDP FGGQTFERPW FGDTMERARL KADVAFELFE ILGVPFFTFH DADVRPEGAS YSESVARLND IADYIAAKME KTGVRLLWGT ANLFSHRRFM AGAATNPDPD VFAYAAATVK ACIDVTKRLN GENYVLWGGR EGYETLLNTD LGRELDQLGR FLSMVVDYKH RIGFKGAILI EPKPQEPTKH QYDFDVGTVY GFLKRYGLED EVKVNIEQGH ALLAGHSFEH ELALAATLGI FGSIDMNRND YQSGWDTDQF PNNAPEAALA YYYILQAGGF TTGGTNFDAK LRRQSLDPED LVAAHIGGMD ICAQGLKAAA RMIEDKALSG PLEERYSGWN ATEAQAMLKG ERSLEAIAER VARENLDPKP RSGRQEKLEN IINRYV
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