Gene Meso_2812 details

Gene Information

• Locus tag: Meso_2812
• ID: 4179691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 3061251
• End bp: 3061808
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 638068700
• Product: tripartite ATP-independent periplasmic transporter DctQ
• Protein accession: YP_675353
• Protein GI: 110635145
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGAACAA TTGCCCTGAT CGTCCGCGCA ATAAACGCGT TTAACGCGCT TATCGGTCAA 
GTTTTCTCGT GGCTGTCGCT TGCAATCGTC CTGGTCTGCT TCACCGTTGT CGTGCAGAGA 
TATGTCTTTT CCGTCAGCTT CGTCTGGATG CAGGACCTCT ATGTTTGGCT GAACGGAGCG 
ATGTTCACCG CTGTCGCCGG CTTTGCCCTG CTTCGCAACG ACCATGTCCG CGTCGACATT 
TTTTATCGTC CGGCCTCCAC CCGCACCAAA GCGATCGTGG ACCTGATCGG GGTTGTATTG 
TTCCTCCTCC CGTTCTGCTG GATAGTCTAT CGCTATGGCT GGCCGTTCGT CGCGCGTTCC 
TGGCGCATCT ATGAAGCCTC GCCGAATACC GGCGGCATGC GGGGGCTCTA CATCCTGAAG 
AGCTTTATCC TTGTTTTCGC CGCGCTTGTT GCGTTGCAGG GCATATCCAT GGCCCTGCGC 
AGCATTCTGG TGCTCGCCGG GGCCGAGCAG CTGCTGCCGG AAAAGCTGCG TTACCAAAGT 
GACGGGGGCG CACACTGA 

 

Protein sequence

MRTIALIVRA INAFNALIGQ VFSWLSLAIV LVCFTVVVQR YVFSVSFVWM QDLYVWLNGA 
MFTAVAGFAL LRNDHVRVDI FYRPASTRTK AIVDLIGVVL FLLPFCWIVY RYGWPFVARS 
WRIYEASPNT GGMRGLYILK SFILVFAALV ALQGISMALR SILVLAGAEQ LLPEKLRYQS 
DGGAH